Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi197g00036 ATGAAGTCGAAATTCTCTAATGTTGCTCTTGTTCTATTAATCGCATCACTGTCTCTCTTTAGCTTGATTGTAGCTGCTTCTGACTTAAACTCAGACCGACAAGCTCTATTGGAGTTTGCTTCTTCTGTTCCACATGCACCAAGGCTCAACTGGAATGACTCATCTTCAATTTGTACCTCATGGACTGGTGTAACTTGCAACTCAAACCGAACTCGTGTCGTAGGCATCCATCTTCCAGGAATCGGATTAACCGGGTCGATTCCGGAGAACACAATAGGAAAACTAGATGCTCTTAGAGTTCTAAGCCTTCATTCCAACGGTCTTAGAGGGAGTCTTCCTTCTAACATCCTTTCCATTCCTTCACTCCAATTCGCACACCTGCAGAAAAACAACTTCTCAGGTCTAATTCCGTCTTCCGTCTCTCCTAAACTAGTTGTATTCGATATTTCCTTTAACTCTTTCTCTGGTATCATACCATCCGAGTTTCAGAACCTGAGAAGACTCACTTGGTTTTATCTCCAAAACAATTCTATATCTGGGCCTATCCCCGACTTCAACCTCCCAAGTCTCAGATACTTGAATTTGAGCAATAATAACTTGAACGGTTCTATTCCAAATTCCATCAAAACATTCCCGTCTACTTCTTTTCTCGGAAACTCTCTCTTATGCGGTCCACCTCTTCTCAATAATTGCTCTTCAATCTCTCCTTCTCCATCTCCTTCCCCTGCACTCACACAAAACGAAAAAGATACGACGGCCCATAAGAAAAGCTTTGGCATAGCGGTTATACTTGCTCTAGTCATTGGAGGAATCGCCTTACTATCTCTACTAGTGTTAGTGTTCTTTGTATGCTTCTTGAAGAAGAAAACCAATAAAAGAAGCGGCATACTGAAAGGAAAGGCCTCTTCTTGTGCTGGAAAGACTGAAGTTTCGAAGAGTTTTGGAAGCGGAGTGCAGGCTGCTGAAAAGAACAAGTTATTTTTCTTCGAAGGTTCTTCTTATACCTTTGATCTCGAAGATCTACTAAAGGCTTCAGCTGAAGTTCTCGGTAAAGGGAGCTACGGTACAGCGTACAAGGCGGTTTTGGAGGAGGGGGTGACAATGGTTGTTAAAAGGTTGAAGGAAGTTGTGGTAGGAAAGAAGGAGTTTGAACAACAGTTGGATATTGTCGGGAGATTCGGACGCCACCCTAATGTCATGCCACTTAGAGCTTATTACTATTCCAAAGATGAGAAACTTTTGGTTTACAATTACATGTCAGGAGGCAGCTTATTTTTCCTGTTGCATGGAAACAAAGGAGCAGGAAGAACACCATTTGATTGGGATTCAAGAGTAAAAGTCGCACTCGGAACAGCTAAAGGAATCGCTTTCATTCACTCAGAAGGAGGTTCAAAATTCACACACGGAAACATAAAGTCAACCAATGTACTAATAACACAAGAATTCGATAGCTGCATTTCTGATGTTGGACTACCTCCTCTGATGAACGCGCCCGCAACAATGTCTAGAACAAACGGATACAGAGCACCCGAAGTAACCGATTCCAAAAAGATCACACAGAAGTCCGACGTATACAGCTTCGGCGTGCTGCTACTTGAAATGCTAACAGGAAAGACTCCGCTGAGATATCCCGGTTATGAAGATGTTGTTGAACTTCCAAGATGGGTTAAGTCCGTTGTGAGAGAGGAGTGGACGGCTGAAGTATTCGATGAAGAACTTCTTAGAGGACAATATGTTGAAGAGGAAATGGTTCAGATGCTTCAGATTGCACTTGCGTGTGTCGGTAAGACGCCGGATATGAGGCCGAGAATGGATGAAGCTGTTAGAATGATAGAGGAAATTAAACATCCTGAGTTTAAGAACAGGACATCCTCGGAGTCTGAATATTCTAATCTTCAAACACCATAA 1908 0.4261 MKSKFSNVALVLLIASLSLFSLIVAASDLNSDRQALLEFASSVPHAPRLNWNDSSSICTSWTGVTCNSNRTRVVGIHLPGIGLTGSIPENTIGKLDALRVLSLHSNGLRGSLPSNILSIPSLQFAHLQKNNFSGLIPSSVSPKLVVFDISFNSFSGIIPSEFQNLRRLTWFYLQNNSISGPIPDFNLPSLRYLNLSNNNLNGSIPNSIKTFPSTSFLGNSLLCGPPLLNNCSSISPSPSPSPALTQNEKDTTAHKKSFGIAVILALVIGGIALLSLLVLVFFVCFLKKKTNKRSGILKGKASSCAGKTEVSKSFGSGVQAAEKNKLFFFEGSSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGVTMVVKRLKEVVVGKKEFEQQLDIVGRFGRHPNVMPLRAYYYSKDEKLLVYNYMSGGSLFFLLHGNKGAGRTPFDWDSRVKVALGTAKGIAFIHSEGGSKFTHGNIKSTNVLITQEFDSCISDVGLPPLMNAPATMSRTNGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKTPLRYPGYEDVVELPRWVKSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVGKTPDMRPRMDEAVRMIEEIKHPEFKNRTSSESEYSNLQTP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi197g00036 635 FunFam Leucine-rich repeat receptor-like protein kinase 31 141 - -
Vivi197g00036 635 FunFam Leucine-rich repeat receptor-like protein kinase 142 231 - -
Vivi197g00036 635 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 419 625 - -
Vivi197g00036 635 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Vivi197g00036 635 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Vivi197g00036 635 PANTHER OS05G0588300 PROTEIN 13 625 - -
Vivi197g00036 635 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Vivi197g00036 635 Gene3D Ribonuclease Inhibitor 142 233 IPR032675 -
Vivi197g00036 635 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi197g00036 635 Pfam Leucine rich repeat 126 178 IPR001611 GO:0005515
Vivi197g00036 635 SUPERFAMILY L domain-like 33 227 - -
Vivi197g00036 635 ProSitePatterns Protein kinases ATP-binding region signature. 349 380 IPR017441 GO:0005524
Vivi197g00036 635 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Vivi197g00036 635 Gene3D Transferase(Phosphotransferase) domain 1 419 633 - -
Vivi197g00036 635 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi197g00036 635 SUPERFAMILY Protein kinase-like (PK-like) 347 614 IPR011009 -
Vivi197g00036 635 FunFam pollen receptor-like kinase 1 311 418 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi197g00036 25 615 Receptor kinase-like Gene Family AT5G58300 60.168 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi197g00036 Pkinase 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi197g00036 - - aprc:113868460 950.658