Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi197g00023 ATGAAAGGAGGAAGGAAGAATTTGAAAAGAGCATCAGAGGAAAAACATGTAACTCTCGGAGACGGCCAATGCATCATGCAAGTAGTCTCTCTTCGAGGCTCCAATCTTATTGAGGTTATGGATGCAACTGGAGAGAAATCACTAGCTCTATTTCCGGCTAAATTCCAGAAAAGCATGTGGATTAAACGAGGAAATTTTGTTGTAGTTGATGAGAGCGGAAAGAAAGAGGCTCTTGAATCGGGAAGTAAGGTTGGGTGTATTGTTTCTCAAGTTCTTTTCTATGATCAACTCCGCGCATTAAAGAAATCTTCAGAATGGCCTGAGATTTTTAAAGATGATCTAAATGAAAGAGTTGTCGCGCAACAAGAGAATGAGTCGGACGCGAGTGATGATGATGGGTTGCCTCCATTGGAAGCCAATACAAACAGGATGAGACCTTTTGAACCAGAAGATGAAGAATCCGATTCAGATAATGATGATCATTTTGTTGGCTCACATAGTTCAACCAAAACTCTGTAA 519 0.4066 MKGGRKNLKRASEEKHVTLGDGQCIMQVVSLRGSNLIEVMDATGEKSLALFPAKFQKSMWIKRGNFVVVDESGKKEALESGSKVGCIVSQVLFYDQLRALKKSSEWPEIFKDDLNERVVAQQENESDASDDDGLPPLEANTNRMRPFEPEDEESDSDNDDHFVGSHSSTKTL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi197g00023 172 Gene3D - 1 134 IPR012340 -
Vivi197g00023 172 SMART eIF1neu4 18 107 IPR001253 GO:0003743|GO:0006413
Vivi197g00023 172 Pfam Translation initiation factor 1A / IF-1 22 72 IPR006196 GO:0003723|GO:0003743|GO:0006413
Vivi197g00023 172 SUPERFAMILY Nucleic acid-binding proteins 4 131 IPR012340 -
Vivi197g00023 172 ProSiteProfiles S1 domain IF1 type profile. 8 70 IPR006196 GO:0003723|GO:0003743|GO:0006413
Vivi197g00023 172 PANTHER TRANSLATION INITIATION FACTOR-RELATED 1 160 IPR039294 -
Vivi197g00023 172 MobiDBLite consensus disorder prediction 119 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi197g00023 2 123 Eukaryotic Initiation Factors Gene Family AT2G04520 33.846 9.70e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi197g00023 K15025 - mtr:25489815 237.654