Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi197g00015 ATGTTTAGTGTGAAGAAAATGGAAGCTTCATTAAACATGAGAGTTATGAGATTTTTTCTCGTGTTCTTACTGTTTTTGGTGACGGTGACGGTGACAGCTGTTAGCCCCTCTTTAAACGACGACGTTTTGGGACTGATTGTGTTCAAAGCGGATATACAAGATCCGAAGGGAAAGTTAGCATCTTGGAATGAAGATGATGAAAGTGCTTGCAGTGGTAGTTGGGTTGGTGTGAAATGCAACGCTAAATCTAATAGAGTTGTGGAGGTTAACCTGAATGGGTTTTCTTTATCAGGAAGAATTGGGCGTGGTTTGCAGCGTTTGCAGTTTCTTCGTCGGCTTTATTTGGCGAATAACAATCTTACAGGGAGTATAACTCCTAATATTGCTACTATTGATAACCTTAGGGTTCTTGATTTGAGTAATAATAATCTTTCAGGGGTTGTTCCTGATGATTTTTTTCGACAATGTGGGTCGATGAGAGTTGTTTCTTTCGCGGGGAATTTGTTTTCTGGTAACATACCTTCTAGTTTAGGGTCGTGCTCAGCTGTTGCTACTATTGACCTTTCTGGTAACCAGTTTGAGGGTAATGTTCCTAAGGAGATTTGGAGTTTGAGTGGACTTAGGTCTCTTGATTTTTCTGATAATTTGTTGGAAGGTGAGATTCCGGAAGGTGTTGAGGCGTTGAAGAATTTGAGAAGTGTTGACTTAGCTAGGAATAGCTTTTCTGGGAAGATACCTTATGGGTTTGGAAGTTGTTTGCTTTTGAGGTCTATTGATTTTGGTGAGAATTCTTTCTCGGGTAGTATTCCTGGTGATTTGAAGGATTTGGTTTTGTGTGGTTACTTTAGTTTGCGTGGAAACGCTTTCTCAGGAGATGTTCCTGAGTGGATTGGAGAGATGAAGGGTCTTCAGACGTTGGATCTTTCTCGGAATAGATTTTCTGGTTTGGTGCCGAATTCTTTAGGAAAGCTTTGGTCAATGAAAACATTGAATCTTTCTGGAAATGGTTTCACGGGCAATCTTCCTGAATCCATGGTGAATTGCACAAACCTTTTGGCTTTGGATGTTAGCCAAAATTCTTTGTCTGGAGATCTGCCTTCTTGGATTTTTGGGTCAGATTTGGAGAAGGTCTCGATGGCAGATAACAAAATGAGTGTTAGGGTGAAAAGCCCTTTGTATTCCTCGACTGAAGTTATGGTTCAGAGTCTTCAAGTTTTGGATTTATCTCACAATGCATTTTCTGGTGAAATCTCTTCCGCTGTTTCATATTTAAGCAGATTGCAGGTTTTGAATTTATCATATAACTCTTTGGGGGGTCATATTCCGGCTTCAATCGGTGATTTGAGAACATGTTCTAGTCTTGATTTGAGTTATAATAAGCTAAACGGAAGCATACCTCGGGAAATTGGGGGAGCTCTTTCCTTGAAAGAACTTAATTTGGAAAACAATTTCCTTATTGGGAAAATCCCAATTTCAATTCAGAACTGCTCTTCATTAACAACTTTGATTCTGTCGAAGAACAAGCTGAGTGGGTCAATACCAGCAGCAGTTGCAAAACTCACCAACTTGAAAACTGTGGACATATCAGTCAACAATCTTAATGGAAGCCTTCCTAAACAATTGGCCAACCTTCCCAATCTCCTGACCTTCAATTTATCTCACAATAATCTTCAGGGCGAACTGCCAGCTGGTGGTTTCTTTAACACCATTTCACCTTCCGCCGTTGCTGGCAATCCATTTCTGTGTGGCTCTATTGTAAACATAAAATGCCCTGTGCGGCTCCCAAAGCCTATTGTTCTGAATCCCAACTTTTCTGGTGACTCTGACCCAGGGTCGCCTACTCCAATGTCGGGTCACAAGAGAAATATTCTCAGCATTTCAGCACTCATTGCCATCGGTGCAGCTGCTTTCATTGTAATCGGTGTTATTGGCATCACTGTTCTCAACCTCCGTGTTCGGTCCGCCGCATCTCGTTCTCCAGTGGCCCTTGATTTTTCCGCAGGGGATGATTATAGCCGTTCGCCAACCACAGATGCCAACTCCGGCAAGCTTGTCATGTTTTCAGGTGAACCTGATTTCAGCTCTGGTGCACATGCTTTACTGAACAAGGATTGCGAGCTTGGGCGTGGAGGATTTGGTGCTGTGTACCAAACAGTGCTAGGAGACGGTCGTTCAGTTGCTATAAAGAAGCTCACCGTGTCGAGCCTTGTCAAGTCACAAGAAGATTTCGAGAGGGAAGTGAAGAAATTAGGAAAAGTCAGACACCAAAATCTTGTTGAACTCGAAGGCTATTATTGGACTTCATCACTTCAACTCCTCATATACGAGTTTGTCTCTCGCGGTAGCCTTTACAAACATCTCCACGAAGGATCAGGCGAAAACTTCCTTTCATGGAACGAGAGGTTTCACGTCATTCTTGGGTCAGCAAAGGCCTTAGCTCACTTACACCACTCCAACATTATTCACTACAACATTAAGTCAACCAACATCCTCATCGATAGCTACGGCGAACCTAAGGTTGGCGATTACGGCCTAGCAAGGCTACTACCAATGCTCGACCGCTATGTCTTGAGCAGCAAAATTCAAAGCGCACTCGGCTACATGGCACCGGAGTTCGCCTGCAAAACAGTGAAAATCACCGAGAAATGCGATGTTTACGGATTCGGAGTTTTGGTATTGGAGATTGTGACAGGGAAAAGGCCTGTAGAGTATATGGAGGATGATGTTGTTGTACTTTGTGACATGGTTAGAGGAGCATTGGATGAAGGGAGAGTAGAGGAATGCATTGATGAGAGGCTACTAGGGAAGTTTCCAGTAGAAGAAGTGATTCCTGTGATTAAGCTTGGTTTGGTATGTACTTCACAAGTGCCATCTAATAGGCCAGAAATGGGAGAGGTAGTTACCATATTGGAGCTTATAAGATGCCCTTCAGAAGGACAAGAAGAGTTGCTGGGATGA 2958 0.429 MFSVKKMEASLNMRVMRFFLVFLLFLVTVTVTAVSPSLNDDVLGLIVFKADIQDPKGKLASWNEDDESACSGSWVGVKCNAKSNRVVEVNLNGFSLSGRIGRGLQRLQFLRRLYLANNNLTGSITPNIATIDNLRVLDLSNNNLSGVVPDDFFRQCGSMRVVSFAGNLFSGNIPSSLGSCSAVATIDLSGNQFEGNVPKEIWSLSGLRSLDFSDNLLEGEIPEGVEALKNLRSVDLARNSFSGKIPYGFGSCLLLRSIDFGENSFSGSIPGDLKDLVLCGYFSLRGNAFSGDVPEWIGEMKGLQTLDLSRNRFSGLVPNSLGKLWSMKTLNLSGNGFTGNLPESMVNCTNLLALDVSQNSLSGDLPSWIFGSDLEKVSMADNKMSVRVKSPLYSSTEVMVQSLQVLDLSHNAFSGEISSAVSYLSRLQVLNLSYNSLGGHIPASIGDLRTCSSLDLSYNKLNGSIPREIGGALSLKELNLENNFLIGKIPISIQNCSSLTTLILSKNKLSGSIPAAVAKLTNLKTVDISVNNLNGSLPKQLANLPNLLTFNLSHNNLQGELPAGGFFNTISPSAVAGNPFLCGSIVNIKCPVRLPKPIVLNPNFSGDSDPGSPTPMSGHKRNILSISALIAIGAAAFIVIGVIGITVLNLRVRSAASRSPVALDFSAGDDYSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLGDGRSVAIKKLTVSSLVKSQEDFEREVKKLGKVRHQNLVELEGYYWTSSLQLLIYEFVSRGSLYKHLHEGSGENFLSWNERFHVILGSAKALAHLHHSNIIHYNIKSTNILIDSYGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEIVTGKRPVEYMEDDVVVLCDMVRGALDEGRVEECIDERLLGKFPVEEVIPVIKLGLVCTSQVPSNRPEMGEVVTILELIRCPSEGQEELLG 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi197g00015 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 255 971 - -
Vivi197g00015 985 Gene3D Phosphorylase Kinase; domain 1 695 777 - -
Vivi197g00015 985 Gene3D Ribonuclease Inhibitor 39 318 IPR032675 -
Vivi197g00015 985 Gene3D Ribonuclease Inhibitor 319 594 IPR032675 -
Vivi197g00015 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 320 594 - -
Vivi197g00015 985 ProSiteProfiles Protein kinase domain profile. 701 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi197g00015 985 Pfam Protein tyrosine and serine/threonine kinase 703 910 IPR001245 GO:0004672|GO:0006468
Vivi197g00015 985 SUPERFAMILY L domain-like 67 385 - -
Vivi197g00015 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 39 319 - -
Vivi197g00015 985 PRINTS Leucine-rich repeat signature 134 147 - -
Vivi197g00015 985 PRINTS Leucine-rich repeat signature 424 437 - -
Vivi197g00015 985 ProSiteProfiles Leucine-rich repeat profile. 133 154 IPR001611 GO:0005515
Vivi197g00015 985 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Vivi197g00015 985 SUPERFAMILY Protein kinase-like (PK-like) 704 976 IPR011009 -
Vivi197g00015 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 778 979 - -
Vivi197g00015 985 Pfam Leucine Rich Repeat 474 496 IPR001611 GO:0005515
Vivi197g00015 985 Pfam Leucine Rich Repeat 133 152 IPR001611 GO:0005515
Vivi197g00015 985 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Vivi197g00015 985 Gene3D Transferase(Phosphotransferase) domain 1 778 982 - -
Vivi197g00015 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 695 777 - -
Vivi197g00015 985 CDD STKc_IRAK 707 973 - -
Vivi197g00015 985 SUPERFAMILY L domain-like 273 606 - -
Vivi197g00015 985 Pfam Leucine rich repeat 498 557 IPR001611 GO:0005515
Vivi197g00015 985 Pfam Leucine rich repeat 283 336 IPR001611 GO:0005515
Vivi197g00015 985 Pfam Leucine rich repeat 402 461 IPR001611 GO:0005515
Vivi197g00015 985 SMART LRR_typ_2 204 228 IPR003591 -
Vivi197g00015 985 SMART LRR_typ_2 300 323 IPR003591 -
Vivi197g00015 985 SMART LRR_typ_2 544 568 IPR003591 -
Vivi197g00015 985 SMART LRR_typ_2 131 154 IPR003591 -
Vivi197g00015 985 SMART LRR_typ_2 107 130 IPR003591 -
Vivi197g00015 985 SMART LRR_typ_2 424 448 IPR003591 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi197g00015 16 983 Receptor kinase-like Gene Family AT3G56370 66.119 0.0 1237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Vivi197g00015 PK_Tyr_Ser-Thr 8.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi197g00015 - - mtr:25489825 1666.36