LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi197g00009	ATGTCGACCCCGTTCCACCGTCGATCTCAATCGGAGGTACATTTCCGAATCCCCGACGACTTCGACCTCGAAATGGATCCCTTCGACTTCGACGCCTCTCCGCTCCATTTCCAAGATCCACAACCACACGACGATCTCCTCTCTTCCTACATTGATTCCGACAATTCCGGATCCAAACTCAACTCTCCTCCTCCCAATGCAGATGCCGGTAGGCCCGGTCACCGCCGTAGCAACTCCGCCGATACATCTTCTTCCATGTTATCAGAAGGAATCGAATCTAAGAAGGCCATGTCCCCTGATAAACTCGCTCAATTATGGACCGTTGATCCGAAACGAGCCAAGAGGATTCTGGCTAACCGTCAATCTGCTGCACGTTCGAAAGAGAGGAAAGCTTGTTACGTGGTTGAGCTTGAGAGAAAAATTCATACTCTTCAAACTGAAGCAACTACTCTTTCTGCTCAATTAAATCTTTTCCAGAGAGATACAAGTGGTCTGTCTAGTGAAAATACCGAGTTGAAGCTTCGGTTACAAGGCATGGAGCAACAAGCTAAGTTATGTGATGCTCTAAATGAAGCCTTGAAGAATGAAGTTGATAGGCTGAAGGTTGCTACTGGAGAGGTAACAACCCATGCTGATACATATGGCTTGGGAATGCATCAACTTTCATATTCTCAAGCTTCACCCTTCATGCACCAGCCACAACATAGTCAGAACGAACTTCGGGCCATGCAAATGCAGCAGTTTCATTCATACTCATCTAACATATCCAATCCCCACCAGCCTCAGTTTGATCTACCCACTTCATATGATTTGTCAGAAATGCTGTCAAGTGATTCTATCGGCCAGTTTCAGGGGCTGGATATTGGCCACAGGGTTTCTCATGTTCTGATGCCTGATGGTCCCTCCGTTTCTGTTAATAAAACCAACAACGCCTTTTGA	939	0.4654	MSTPFHRRSQSEVHFRIPDDFDLEMDPFDFDASPLHFQDPQPHDDLLSSYIDSDNSGSKLNSPPPNADAGRPGHRRSNSADTSSSMLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEATTLSAQLNLFQRDTSGLSSENTELKLRLQGMEQQAKLCDALNEALKNEVDRLKVATGEVTTHADTYGLGMHQLSYSQASPFMHQPQHSQNELRAMQMQQFHSYSSNISNPHQPQFDLPTSYDLSEMLSSDSIGQFQGLDIGHRVSHVLMPDGPSVSVNKTNNAF	312

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi197g00009	312	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	109	172	IPR004827	GO:0003700\|GO:0006355
	Vivi197g00009	312	Gene3D	-	110	177	-	-
	Vivi197g00009	312	MobiDBLite	consensus disorder prediction	28	98	-	-
	Vivi197g00009	312	Pfam	bZIP transcription factor	111	169	IPR004827	GO:0003700\|GO:0006355
	Vivi197g00009	312	SMART	brlzneu	107	171	IPR004827	GO:0003700\|GO:0006355
	Vivi197g00009	312	MobiDBLite	consensus disorder prediction	48	63	-	-
	Vivi197g00009	312	MobiDBLite	consensus disorder prediction	76	91	-	-
	Vivi197g00009	312	SUPERFAMILY	Leucine zipper domain	111	165	IPR046347	GO:0003700\|GO:0006355
	Vivi197g00009	312	PANTHER	TRANSCRIPTION FACTOR POSF21-RELATED	5	250	-	-
	Vivi197g00009	312	Coils	Coil	176	196	-	-
	Vivi197g00009	312	CDD	bZIP_plant_RF2	112	161	IPR044759	GO:0003700\|GO:0006355
	Vivi197g00009	312	Coils	Coil	134	154	-	-
	Vivi197g00009	312	FunFam	probable transcription factor PosF21	110	163	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi197g00009	4	288	bZIP Transcription Factor Family	AT2G40620	51.070	4.96e-88	266

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Vivi197g00009		bZIP_1	8.3e-09	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi197g00009	-		-	aprc:113852914	453.751