Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi194g00007 ATGTTCCTACCTTTTTGTTACCACACTAAACTCTCCCACAAAAACAAAACAACATTATCTCAACACAGTCTTATGAACTTCACGTGTCGTGTTTTCTCTCCTCATTCACAATCACACACACACACACAAACTAACATATATGATATATCATCATCCACATTCCCCAACACACCAATATTAGTAAAATTTCACCAAAAACTAAACATGTTTCCTCTCTTATTCCTACTCCTAAAACTACAAATCTTCCTCACACATGCATCTCAATCTCTTCCCATTAACACTGAACTCAACACTCTTATTGCTATCAAACACTCTCTAGACCCAGAAAACCGTGTGTTGTTCTCATGGAACAGTTCTTCTGACCCATGTAATGGTGCTTTTGAAGGTGTGGCTTGTAATGAACAAGGTTTTGTTACTAATATATCACTTCAAGGGAAGGGTTTATCAGGAAATATACCTTCGGCTATTGGTGGTCTTAAGAGTTTGACTGCTCTTTACCTTCATTTCAATGCTTTGAATGGGATTTTGCCTAGGGAAATTGCAGGGTTATCTCAGCTTAGTGATTTGTATCTTAATGTTAATAGTCTCTCTGGTACTATCCCTCGTGAGATTGGTAACATGTCAAATCTTCAAGTTTTGCAGCTTTCTTATAACGAGCTTAATGGAAGTATACCGACCGAGCTAGGAGGACTAGATAAGCTAAGTGTTCTTTCACTCCAATATAATCACTTACGCGGCGCGATTCCTGCAACTTTGGGTGAGCTAGAGTCACTAGAAAGATTGGATCTCAGCTTCAATACCCTTTTTGGTCCAATTCCAGTAACATTGTCTTATGCACCTCAACTACAGACTCTCGATGTTCGAAACAATTCACTCTCCGGAAACATCCCTCTAGATTTGAAAAGACTAGAAGAAGGGTTCAAGTATTCAAACAATCCTGGTTTATGTGGAATTGGATTTGCCAACTTAGATTCTTGTCAAATAGTATACAGTTCAGATCCAGTTAGACCTGAACCATATGTACCTACAAAGAATTCTACAATTGATCATCCGACATCGCCTGAACAAACGGCTAAAAACTGCAGCAATGCTGATTGTAGAAGGCGCTCCGAATCTTTGATAATTGCTTTGATTTTTGTGATGATTGGTGTTATTTTTGTTTCTTCTGTTATTGGGCTTTTTCTGATCTTACGATACCGCCGTCAGAAACAGAAAATTGGAAACACTGTTGAGATTTCTAGTAGCCAGCGGCTTAGTACTGATAAGATCAAGGAAGTGTGCAGGAAAGACGCGTCACGGCTTATTAGTTTGGAGTATTCCAACGGATGGGATCCGTTATCCAAAGATCTCGGTGGTTACTCCCAGGAGTTTCTCCGAAGCTTTATGTTTAATCTCGAAGAAGTAGACCGTGCAACTCAGTGTTTCTCCGAGCTGAATATATTGACGAAGAACAATATTTCGGCTAACTATAGAGGAATCTTGAGAGATGGATCTGTTGTGGTTATAAAGTGCATTGCCAAGACAAGCTGCAAGTCTGATGAAGCTGAGTTCTTGAAAGGCTTGAAGATATTAACTTCGTTAAAACACGATAATCTTGTTCGTTTGAGAGGCTTTTGTTGTTCGAAAGGCCGCGGGGAATGTTTTCTGGTTTACGATTTTGTTTCGAACGGGAGTTTGTCGAAGTATCTGGATGTTAAGAGAGGAAGTGCTGAGGTACTTGAATGGTCCACTAGAGTTTCCATAATCCGTGGTATTGCCAAAGGTATTGGTTATCTACATGGAAAAAACGGAAGGAAGCAATATTCTCTTGTTCATCAGAATATATCAGCCGAAAAAGTACTTCTCGATTCCCGGTATAATTCCTTACTTGCAGATTCAGGATTGCACAAACTTCTTGCAGATGATGTTGTTTTCTCCACCCTCAAAGCTAGTGCTGCAATGGGGTACCTGGCACCAGAGTACGCGACAACGGGTCGTTTTACTGAAAAGAGTGATGTGTACGCTTTCGGGGTGATAGTTTTTCAACTTCTCATTGGAAAACATGATATCACCCTATTAAGTCGCCAATGGGAAGAAACTGGCTGTTTGAAAGATGTTATTGATGAAAATTTTGAAGGAAAGTTTTTAGAATTCGAGGCAGAGAAATTGGCGAGACTAGCCTCGGTTTGCACCAATGAGTCTCCGGATCTCCGGCCGACTATGGAGGATATAATGATAGAACTGAGTGATAAGTTGTAA 2238 0.4004 MFLPFCYHTKLSHKNKTTLSQHSLMNFTCRVFSPHSQSHTHTQTNIYDISSSTFPNTPILVKFHQKLNMFPLLFLLLKLQIFLTHASQSLPINTELNTLIAIKHSLDPENRVLFSWNSSSDPCNGAFEGVACNEQGFVTNISLQGKGLSGNIPSAIGGLKSLTALYLHFNALNGILPREIAGLSQLSDLYLNVNSLSGTIPREIGNMSNLQVLQLSYNELNGSIPTELGGLDKLSVLSLQYNHLRGAIPATLGELESLERLDLSFNTLFGPIPVTLSYAPQLQTLDVRNNSLSGNIPLDLKRLEEGFKYSNNPGLCGIGFANLDSCQIVYSSDPVRPEPYVPTKNSTIDHPTSPEQTAKNCSNADCRRRSESLIIALIFVMIGVIFVSSVIGLFLILRYRRQKQKIGNTVEISSSQRLSTDKIKEVCRKDASRLISLEYSNGWDPLSKDLGGYSQEFLRSFMFNLEEVDRATQCFSELNILTKNNISANYRGILRDGSVVVIKCIAKTSCKSDEAEFLKGLKILTSLKHDNLVRLRGFCCSKGRGECFLVYDFVSNGSLSKYLDVKRGSAEVLEWSTRVSIIRGIAKGIGYLHGKNGRKQYSLVHQNISAEKVLLDSRYNSLLADSGLHKLLADDVVFSTLKASAAMGYLAPEYATTGRFTEKSDVYAFGVIVFQLLIGKHDITLLSRQWEETGCLKDVIDENFEGKFLEFEAEKLARLASVCTNESPDLRPTMEDIMIELSDKL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi194g00007 745 Gene3D Phosphorylase Kinase; domain 1 452 553 - -
Vivi194g00007 745 SUPERFAMILY L domain-like 94 317 - -
Vivi194g00007 745 SMART LRR_typ_2 255 279 IPR003591 -
Vivi194g00007 745 SMART LRR_typ_2 207 231 IPR003591 -
Vivi194g00007 745 SMART LRR_typ_2 183 206 IPR003591 -
Vivi194g00007 745 SMART LRR_typ_2 159 182 IPR003591 -
Vivi194g00007 745 Pfam Protein tyrosine and serine/threonine kinase 498 740 IPR001245 GO:0004672|GO:0006468
Vivi194g00007 745 Pfam Leucine rich repeat N-terminal domain 93 133 IPR013210 -
Vivi194g00007 745 FunFam Protein NSP-INTERACTING KINASE 2 92 241 - -
Vivi194g00007 745 Gene3D Transferase(Phosphotransferase) domain 1 554 745 - -
Vivi194g00007 745 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 140 742 - -
Vivi194g00007 745 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Vivi194g00007 745 Pfam Leucine rich repeat 139 196 IPR001611 GO:0005515
Vivi194g00007 745 SUPERFAMILY Protein kinase-like (PK-like) 453 741 IPR011009 -
Vivi194g00007 745 Gene3D Ribonuclease Inhibitor 242 323 IPR032675 -
Vivi194g00007 745 ProSiteProfiles Protein kinase domain profile. 475 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi194g00007 745 FunFam Protein NSP-INTERACTING KINASE 2 446 553 - -
Vivi194g00007 745 Gene3D Ribonuclease Inhibitor 91 241 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi194g00007 75 588 Miscellaneous Gene Families AT4G22730 50.285 1.18e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Vivi194g00007 PK_Tyr_Ser-Thr 6.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi194g00007 - - vvo:131626249 1466.06