Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi193g00024 ATGGGAACTTGCTGGAGTTCTCTTCTACCTAATAGTCATCCAACTCCATCTCCAACCGGAACTGGAACATATAATTCTCAAACAACAAGTGGAAGCTATGGAACTAGCACTACAACTTTCAATTCTACTTCTACTACTTCTTCTGGAAGTGGAAGCAGTAATAACACGTCTTCCTCCATAAACAGTAGTAATTTCTCATCATCCGATTTTTCAATCGGTGGTCAGATCTTACCTACTTCTAATTTAAGAGTCTACACTTTCGCCGAATTAAAAACTTCTACCAAGAATTTCAAACCTGATACACTTCTCGGAGAAGGAGGTTTTGGAAAAGTCTACAAAGGATTGCTTGATGGAATCCCCATTGCCGTCAAAAAGTTGAACTCCGAAAGTTTACAAGGTCTCGAGGAATGGCAGTCAGAAATAAAATTTCTAGGTCGACTTAACCATCCCAACCTTGTTAAACTCTTGGGATTTTGTTATGAAGATACAGAGCTTCTTCTTGTCTATGAATACTTGCAGAAGGGTTGTTTGGAACATCACCTCTTTGGAAGAGGTAGAGGTACTGTTGATCACCCTCTTCCTTGGGAGCTGAGGCTTAAGATAGCAATCGGAGCAGCTACTGGACTTTCGTTCTTGCATACAGCAGATAGAGAAATTATTTACAGAGATTTTAAAGCCTCTAATATATTGCTTGATGGGTCCTATAATGCAAAGATATCAGATTTTGGGTTGGCAAAACTGGGTCCTTCGGCTAGTCAATCGCATTTGTCCACAACGCCGATGGGAACACTAGGTTACGCAGCTCCTGAATATATACATACAGGGCATCTATATGTAAAGAGTGATGTGTATGGTTTTGGAGTTGTTTTGGTTGAGATACTGACAGGCCAACGATCGATAGATCTCAACCGGCCAATCGGGCGTCACCGTCTAGTGGATTGGATCATACCGTACCTACTGGACAAAAAAAAATTGAAGGAGGTTATGGATCCTCTATTGAAAGACAAGTATCCAATCAAAGATGCACATACTATATCAAAGTTTGCTTCTAAGTGTCTTGCACCTGAGCCCCACAAGCGCCCATCCATGAAGGATGTTTTGGTGATCTTGAAAGGAACTCAAGCTTCCACTGACTAA 1137 0.4116 MGTCWSSLLPNSHPTPSPTGTGTYNSQTTSGSYGTSTTTFNSTSTTSSGSGSSNNTSSSINSSNFSSSDFSIGGQILPTSNLRVYTFAELKTSTKNFKPDTLLGEGGFGKVYKGLLDGIPIAVKKLNSESLQGLEEWQSEIKFLGRLNHPNLVKLLGFCYEDTELLLVYEYLQKGCLEHHLFGRGRGTVDHPLPWELRLKIAIGAATGLSFLHTADREIIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHLSTTPMGTLGYAAPEYIHTGHLYVKSDVYGFGVVLVEILTGQRSIDLNRPIGRHRLVDWIIPYLLDKKKLKEVMDPLLKDKYPIKDAHTISKFASKCLAPEPHKRPSMKDVLVILKGTQASTD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi193g00024 378 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
Vivi193g00024 378 MobiDBLite consensus disorder prediction 1 58 - -
Vivi193g00024 378 FunFam receptor-like protein kinase FERONIA 54 171 - -
Vivi193g00024 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Vivi193g00024 378 Gene3D Transferase(Phosphotransferase) domain 1 172 378 - -
Vivi193g00024 378 ProSiteProfiles Protein kinase domain profile. 97 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi193g00024 378 CDD STKc_IRAK 103 372 - -
Vivi193g00024 378 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 172 378 - -
Vivi193g00024 378 Pfam Protein kinase domain 100 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi193g00024 378 SUPERFAMILY Protein kinase-like (PK-like) 73 370 IPR011009 -
Vivi193g00024 378 Gene3D Phosphorylase Kinase; domain 1 73 171 - -
Vivi193g00024 378 PANTHER OS01G0588500 PROTEIN-RELATED 53 372 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi193g00024 41 370 Glycoside Hydrolase AT3G07070 44.179 6.13e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi193g00024 Pkinase 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi193g00024 - - mtr:11430234 489.189