Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi193g00023 ATGGGAACTTGCTGGAGTTCTCTTCTACCTAATAGTCATCCAACTCCATCTCCAACCGGAACTGTTACGCCTGCAGGAACATATAATTCTCAAACAACAAGTGGAAGCTATGGAACTAGCACTACAACTTTCAATTCTACTTCTACTACTTCTTCTGGAAGTGGAAGCAGTAATAACACGTCTTCCTCCATAAACAGTAGTAATTTCTCATCATCCGATTTTTCAATCGGTGGTCAGATCTTACCTACTTCTAATTTAAGAGTCTACACTTTCGCCGAATTAAAAACTTCTACCAAGAATTTCAAACCTGATACACTTCTCGGAGAAGGAGGTTTTGGAAAAGTCTACAAAGGATTGCTTGATGGAATCCCCATTGCCGTCAAAAAGTTGAACTCCGAAAGTTTACAAGGTCTCGAGGAATGGCAGTCAGAAATAAAATTTCTAGGTCGACTTAACCATCCCAACCTTGTTAAACTCTTGGGATTTTGTTATGAAGATACAGAGCTTCTTCTTGTCTATGAATACTTGCAGAAGGGTTGTTTGGAACATCACCTCTTTGGAAGAGGTAGAGGTACTGTTGATCACCCTCTTCCTTGGGAGCTGAGGCTTAAGATAGCAATCGGAGCAGCTACTGGACTTTCGTTCTTGCATACAGCAGATAGAGAAATTATTTACAGAGATTTTAAAGCCTCTAATATATTGCTTGATGGGTCCTATAATGCAAAGATATCAGATTTTGGGTTGGCAAAACTGGGTCCTTCGGCTAGTCAATCGCATTTGTCCACAACGCCGATGGGAACACTAGGTTACGCAGCTCCTGAATATATACATACAGGGCATCTATATGTAAAGAGTGATGTGTATGGTTTTGGAGTTGTTTTGGTTGAGATACTGACAGGCCAACGATCGATAGATCTCAACCGGCCAATCGGGCGTCACCGTCTAGTGGATTGGATCATACCGTACCTACTGGACAAAAAAAAATTGAAGGAGGTTATGGATCCTCTATTGAAAGACAAGTATCCAATCAAAGATGCACATACTATATCAAAGTTTGCTTCTAAGTGTCTTGCACCTGAGCCCCACAAGCGCCCATCCATGAAGGATGTTTTGGTGATCTTGAAAGGAACTCAAGCTTCCACTGACTAA 1149 0.4134 MGTCWSSLLPNSHPTPSPTGTVTPAGTYNSQTTSGSYGTSTTTFNSTSTTSSGSGSSNNTSSSINSSNFSSSDFSIGGQILPTSNLRVYTFAELKTSTKNFKPDTLLGEGGFGKVYKGLLDGIPIAVKKLNSESLQGLEEWQSEIKFLGRLNHPNLVKLLGFCYEDTELLLVYEYLQKGCLEHHLFGRGRGTVDHPLPWELRLKIAIGAATGLSFLHTADREIIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHLSTTPMGTLGYAAPEYIHTGHLYVKSDVYGFGVVLVEILTGQRSIDLNRPIGRHRLVDWIIPYLLDKKKLKEVMDPLLKDKYPIKDAHTISKFASKCLAPEPHKRPSMKDVLVILKGTQASTD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi193g00023 382 Pfam Protein kinase domain 104 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi193g00023 382 CDD STKc_IRAK 107 376 - -
Vivi193g00023 382 PANTHER OS01G0588500 PROTEIN-RELATED 57 376 - -
Vivi193g00023 382 Gene3D Phosphorylase Kinase; domain 1 77 175 - -
Vivi193g00023 382 Gene3D Transferase(Phosphotransferase) domain 1 176 382 - -
Vivi193g00023 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Vivi193g00023 382 ProSiteProfiles Protein kinase domain profile. 101 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi193g00023 382 MobiDBLite consensus disorder prediction 1 62 - -
Vivi193g00023 382 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 176 382 - -
Vivi193g00023 382 FunFam receptor-like protein kinase FERONIA 58 175 - -
Vivi193g00023 382 SUPERFAMILY Protein kinase-like (PK-like) 77 374 IPR011009 -
Vivi193g00023 382 ProSitePatterns Protein kinases ATP-binding region signature. 107 129 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi193g00023 45 374 Glycoside Hydrolase AT3G07070 44.179 6.64e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi193g00023 Pkinase 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi193g00023 - - mtr:11430234 503.442