Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi193g00010 ATGGGCAATACATGCCGTGGATCTTTGAAAGGAAAATACATCCAGGGCTTCACCCAGCCCGAGTCCGACACTTCCAATTCCAATTCGAATTCCAAACAATCTCCCAAAACCACTCATCACCCTCCACCCTTCAACTTCACCACCACCGCCATGCGTCGTACTGCCGATAACCAGACTTATTATGTCTTGGGTCATAAGACTCCCAACATACGTGATCTATACACTCTTGGCCGCAAACTCGGTCAAGGTCAATTCGGTACTACTTTTCTAGCTGTTGATAATTCCACCTCTATTGAGTATGCTTGCAAATCTATTTCCAAGAGGAAGCTTATTTCTAAAGAGGATGTCGAGGATGTCAGGAGGGAAATTCAGATTATGCATCATTTGGCTGGTCATAAGAATATTGTTACCATTAAGGGTGCTTATGAGGATTCACTTTATGTTCATATTGTTATGGAGCTTTGTTCCGGGGGTGAGCTCTTTGATCGGATTATCCAGAGAGGTCACTATACGGAGAGGAAGGCCGCCGAGTTGACCAAGATTATTGTTGGTGTTGTCGAAGCTTGTCATTCTCTTGGAGTTATGCATAGAGATCTCAAGCCTGAGAACTTTTTGTTGGTCAATAAAGATGATGATTTCTCTCTTAAAGCTATTGACTTTGGCCTCTCCGTTTTCTTCAAACCAGGTCAAGTTTTCACTGATGTAGTTGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGACCTGAAGCAGATGTGTGGACCGCGGGTGTCATACTTTATATATTGCTCAGTGGTGTGCCACCGTTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCGGTATTGAAGGGACATATAGATTTTGAATCAGATCCATGGCCTTTAATATCGGATAGCGGAAAAGATCTTATTAGAAAGATGCTGTGTTCTCGGCCTTCTGATCGATTAACTGCCCATGAAGTTTTATGTCATCCTTGGATATGCGAAAATGGCGTTGCCCCTGACAGAGCATTGGATCCTGCTGTGCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTTTACGGGTAATTGCGGAAAGTCTATCCGAGGAGGAAATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACCGATAGCAGTGGTGCAATCACTTTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATACAGAAATACGCGATCTTATGGAAGCGGCTGACGTGGACAACAGTGGAACAATAGATTACGGGGAGTTTATTGCTGCAACAGTTCATCTCAACAAACTGGAGCGTGAGGAGCATCTTGTTGCAGCATTCCGATATTTTGACAAGGACGGAAGTGGTTATATTACAGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACTGATGTTTTTCTTGAAGATATTATCAAGGAAGTTGATCAAGATAACGATGGAAGGATTGATTATGGTGAATTTTCTGCCATGATGCAAAAAGGCAATGTTGGGGTTGGTAGGAGGACTATGCGCAACAGTGTGAATTTGAGCATGAGGGACGCACCGAGTAGCTTTTAG 1614 0.4331 MGNTCRGSLKGKYIQGFTQPESDTSNSNSNSKQSPKTTHHPPPFNFTTTAMRRTADNQTYYVLGHKTPNIRDLYTLGRKLGQGQFGTTFLAVDNSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDSLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSGKDLIRKMLCSRPSDRLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDSSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFRYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIKEVDQDNDGRIDYGEFSAMMQKGNVGVGRRTMRNSVNLSMRDAPSSF 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi193g00010 537 CDD EFh 451 511 IPR002048 GO:0005509
Vivi193g00010 537 MobiDBLite consensus disorder prediction 12 45 - -
Vivi193g00010 537 ProSitePatterns EF-hand calcium-binding domain. 494 506 IPR018247 -
Vivi193g00010 537 SMART efh_1 485 513 IPR002048 GO:0005509
Vivi193g00010 537 SMART efh_1 415 443 IPR002048 GO:0005509
Vivi193g00010 537 SMART efh_1 379 407 IPR002048 GO:0005509
Vivi193g00010 537 SMART efh_1 451 479 IPR002048 GO:0005509
Vivi193g00010 537 FunFam Calcium-dependent protein kinase 5 160 340 - -
Vivi193g00010 537 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Vivi193g00010 537 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Vivi193g00010 537 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Vivi193g00010 537 ProSiteProfiles EF-hand calcium-binding domain profile. 486 516 IPR002048 GO:0005509
Vivi193g00010 537 Gene3D Phosphorylase Kinase; domain 1 76 159 - -
Vivi193g00010 537 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi193g00010 537 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Vivi193g00010 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Vivi193g00010 537 Gene3D - 342 514 - -
Vivi193g00010 537 Pfam EF-hand domain pair 380 440 IPR002048 GO:0005509
Vivi193g00010 537 Pfam EF-hand domain pair 450 511 IPR002048 GO:0005509
Vivi193g00010 537 CDD STKc_CAMK 74 331 - -
Vivi193g00010 537 SUPERFAMILY Protein kinase-like (PK-like) 57 356 IPR011009 -
Vivi193g00010 537 FunFam Calcium-dependent protein kinase 1 340 514 - -
Vivi193g00010 537 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Vivi193g00010 537 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Vivi193g00010 537 MobiDBLite consensus disorder prediction 15 45 - -
Vivi193g00010 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 66 506 - -
Vivi193g00010 537 FunFam Calcium-dependent protein kinase 1 76 159 - -
Vivi193g00010 537 Gene3D Transferase(Phosphotransferase) domain 1 160 341 - -
Vivi193g00010 537 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi193g00010 537 Pfam Protein kinase domain 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi193g00010 537 SUPERFAMILY EF-hand 356 513 IPR011992 -
Vivi193g00010 537 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi193g00010 1 533 EF-hand Containing Proteins AT2G17290 83.088 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi193g00010 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi193g00010 K13412 - gmx:100778173 972.615