Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi193g00006 ATGGATAACGAGATGGTGGAATTTGATATTGCTTTGGGAGGAGGAGATTACCAAGAGGACCCTATTGAGATCGACGAGGAAGAAGATGAAGAAGACGAAGAAGAAGAAGATGAAACCAGTGGCGCTGTCTATTTTCCAGAAGCGGGAGATCTAGAACCTTCTGATGGGATGGAATTTGAGTCCGAAGAGGCTGCCAAGGCTTTCTATAATTCATACGCTCGTCGTGTTGGCTTTAGTACTCGTGTCAGCTCATCCCGTCGTTCACGTCGCGACGGAGCTATCATTCAGCGACAATTCGTTTGTGCAAAGGAAGGGTTTCGCAATTTGAACGAGAAACGCACCAAAGATAGAGAGATCAAAAGGCCACGAACGGTTACCAGAGTTGGATGCAAGGCTTCTTTTTCTGTCAAAATGCAGGATTCCGGCAAGTGGATTGTATCTGGGTTTGTCAGAGAGCATAATCACGAACTTGTTCCACCCGATCAGGTTCACTGCCTTCGCTCTCACAGGCAAATATCTGGATCTGCTAAGACCCTCATTGACACTCTTCAGGCAGCTGGTATGGGTCCTCGTAGAATTATGTCAGCACTCATCAAAGAGTATGGTGGGATTAGCAAAGTCGGTTTTACCGAGGTTGATTGTAGGAATTACATGAGGAATAATCGCCACAGAAGTTTACAAGGGGACATTCAACTTGTTCTTGATTATTTGAGACAGATGCATGCTCAAAACCCTAATTTTTTCTTTGCTGTTCAAGGTGATGTTGATGACGAGGATCATTCAATCCACAATGTTTTTTGGGCTGACCCTAAGGCAAGGTTGAATTACACTTTTTTTGGAGATACAGTCACTTTTGACACTACTTATCGCTCTAATAGGTATCGATTACCCTTTGCTCCTTTTACTGGTGTCAACCATCATGGTCAACCGGTTCTCTTTGGTTGTGCTTTTCTAATTAATGAATCCGAGGCTTCATTTGACTGGCTTTTCAAGACATGGCTTATGGCCATGTCTGGACGTCCTCCACTCTCAATAACCACTGACCATGATTCTGTTATTCAGTCCGCCATAATGCAAGTGTTCCCTAACACCCGCCACCGTTTCTGCAAGTGGCACATCTTTAAGCAGTGCCAAGAGAAGTTGTCTCACATTTTCCTCCAGTTTCCAAATTTTGAAGCTGAGTTTCACAAATGTGTTAACTTGACTGACTCAATTGATGAATTTGAGTCTTGCTGGTCCACACTTGTAGATAGATATGGTCTCAGGGACAATGAATGGCTTCAGGCAGTACATTCCGCTTGCAGGCAGTGGGTACCTGTATATTTGCGAGACACGTTCTTTGCAGAAATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTCGATGGCTATGTCAATGCTTCAACCAGTTTAAATCAGTTCTTTAAGCTTTATGAGAAAGCGCTTGAAAGTCGCAATGAGAAAGAAGTAAGAGCAGATTATGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCGATGGAGAGGCAAGCATCCGAGCTTTACACAAGGAAGATTTTCATGAGGTTCCAAGAGGAGTTGGTCGGCACACTAACATTCATGGCATCCAAAGCTGAGGACGATGGAGAGGTCATTACATATCATGTAGCTAAATTTGGAGAAGATCATAAAGCATACATCGTTAGATTCAATGTTTTGGCAATGAAAGCGACTTGCAGTTGCCAAATGTTTGAGTTTTCAGGTCTTCTTTGCAGACATATTCTGGCAGTCTTTAGAGTTACCAATGTCCTTACTCTTCCATCTCATTATATACTGAAACGATGGACAAGAAATGCAAAGAGCAATGTCATTTTGGAAGACCATTCTTGTGATGTATTTACTTACTATTTGGAATCTCATACAGTTAGATATACCACTCTCCGACACGAGGCCTTTAAATTTGTTGATAAAGGTGCAAGCTCCCCTGAAACTTTTGATGTTGCAAAGGATGCTTTACAAGAAGCTGCAAAAAAAGTTGCACAGGTAAACCGAAATGAGGGGAGAACTCCCATCAGCAATGGGAAAGTTAGGAGTCACTTACTGAATAATGAAAGCCGTCCTAATTACACTAGTGGCTGCCAGGATGAAAGCTTGGTCGAGCATATGAATAAGGATGATATGGATAAGCATATCGCAAAACTTACCAATGAGCTTGAGTCTGCAAATAGGAAGTGTGAAATTTATCGGTCCAACTTGCTCTCTGTTTTAAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCAGTAAAGGTGGAAAACATTAAGATAAGCATGAAAGACGGCCTCTGA 2337 0.4245 MDNEMVEFDIALGGGDYQEDPIEIDEEEDEEDEEEEDETSGAVYFPEAGDLEPSDGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTVTRVGCKASFSVKMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGSAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRHRSLQGDIQLVLDYLRQMHAQNPNFFFAVQGDVDDEDHSIHNVFWADPKARLNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFDWLFKTWLMAMSGRPPLSITTDHDSVIQSAIMQVFPNTRHRFCKWHIFKQCQEKLSHIFLQFPNFEAEFHKCVNLTDSIDEFESCWSTLVDRYGLRDNEWLQAVHSACRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTSLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMERQASELYTRKIFMRFQEELVGTLTFMASKAEDDGEVITYHVAKFGEDHKAYIVRFNVLAMKATCSCQMFEFSGLLCRHILAVFRVTNVLTLPSHYILKRWTRNAKSNVILEDHSCDVFTYYLESHTVRYTTLRHEAFKFVDKGASSPETFDVAKDALQEAAKKVAQVNRNEGRTPISNGKVRSHLLNNESRPNYTSGCQDESLVEHMNKDDMDKHIAKLTNELESANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi193g00006 778 MobiDBLite consensus disorder prediction 1 53 - -
Vivi193g00006 778 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Vivi193g00006 778 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 678 IPR031052 GO:0006355
Vivi193g00006 778 Pfam MULE transposase domain 283 375 IPR018289 -
Vivi193g00006 778 Coils Coil 662 682 - -
Vivi193g00006 778 Coils Coil 721 748 - -
Vivi193g00006 778 ProSiteProfiles Zinc finger SWIM-type profile. 563 599 IPR007527 GO:0008270
Vivi193g00006 778 MobiDBLite consensus disorder prediction 19 41 - -
Vivi193g00006 778 Pfam SWIM zinc finger 551 597 IPR007527 GO:0008270
Vivi193g00006 778 SMART 26again6 574 601 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi193g00006 MULE 3.5e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi193g00006 - - gmx:100793442 1337.78