Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi192g00027 ATGATCCATGTACATCATATTTTGTTCTTATGTTTCCTTCTTCATAATTTTCATTTCATCATTTGCATCAGCAATAACACAGATAAAGATATACTTCTATCTTTCAAATTACAACTAACTGATCCAAACAATGTTCTGTCAAATTGGACAACAGATTCAAATCACTGTACCTGGTATGGAGTCAACTGTTCCAAAGCTGGTGAAAGAGTTCAGTCTCTCACCTTATCAGGACTTGGCCTCTCTGGTAAACTACCTTCTAATCTCTCCAACCTCACTTCCCTCCTTTCACTTGACCTTTCCAACAACACTTTTCATGGTCAAATCCCTTCAACTTTTGGCAATCTCATTTCTCTTGAGACTCTTTCTTTGGGAGAGAACAAGTTTATTGGTGAGATTCCAATTGAATTTGGCAATCTCACACTCCTCACTGTCATTCAATTAGCTCGCAACAATCTATCAGGTACACTTCCACCACAATTAGGCCAACTGCATAATCTACAAAGTTTGGACTTTTCTGTCAATAATCTCACAGGTGAAATCCCTTCAACTTTTGGCAATCTCATTTCTCTTGAGAGTCTTTCTATGGCAAGGAACAAGTTTGTTGGTGAGATTCCAATTGAATTGGCCAATCTCCGTAATCTTTCAACACTTCAACTCTCAGAGAACAATTTCTCTGGCAAGTTTCCTACTTCTATTTTCCTCAACCTCTCTTCCTTAGTTTTCTTATCCCTCACGCTGAACAATCTATCAGGCGAGTTGCCGCAAAATATTGGCAACGCCCTTCCAAATTTAACCACACTTGCTATTGCAACCAATAGGTTTGATGGAGTGATTCCAAATTCTATATCCAATTCATCACATCTTCAAACTATTGATCTTTCTAACAATAGATTTCATGGGCCAATACCTCTTTTCAACAACCTGAAAAACCTCACTATTTTGACACTAGCTAATAACTTTCTCACTTCTACAACATCATTGAATTTACAGTTCTTTGATTCCCTTAGAAACTCCACTCAGTTGCAAATCCTTAAGGTCAATTATAACAACTTGACCGGTGAACTTCCGAATTCTGTTGCCTACCTTTCAAGCAATCTACAACAGTTCTGTGTTTCTAATAATCAGCTAAATGGAAGCATTCCTAAGGGAATGAAAAAGTTTCAAAATCTCACATCCTTCTCGTTTGAATGGAATAATTTCACTGGAGAGTTCCCAATAGAACTTGGAACACTCAAGAAATTGCAGCAGCTTTGGATACACCAAAATAGATTGTTTGGCGAAATTCCAGACATATTTGGAAATTTTACAAATCTGTATCAAATTGCAATGAGAAACAACCAGTTCACAGGTAGAATTCCCGCGAGCATCGGACGATGCAAGAGCTTGAATTATCTTGACTTGGGAATGAATAGGCTTGTCGGTGTCATACCAATGGAGATTTTTCAACTCTCTGGATTGACAACTTTGTACCTACGTGGAAACTCGTTGAATGGTTCGCTTCCTCCTGTACTCAACATGGAGCAGTTAGAGTTCATGATTGTTTCGGACAACAAGCTATCGGGGAACATTTCTAACATCCAAGCAAACGGATTGAAGGTACTTCAGATGGCAAGAAATAAATTTGGTGGCTCAATTCCAAATAGTCTAGGAGATTCAGCATTTCTTGAGACTTTGGATCTATCATCAAACAATCTCTCTGGTTCAATTCCTGAGAATTTAGAAGAGCTTAAGTATTTGGTGAGTTTAAATTTGTCTTTCAACAAATTGGAAGGAGAGGTTCCAATGAAAGGTGTTTTTATGAACCTAAGCCAGGTTGATCTTCAAGGTAACAACAGATTATGCGGCCTTAACAATCAAGTTATGCAAAAGTTGGGAGTCACTTTGTGTGTTGCAGGTAAAAAGAACAAGAGAAACAATTTGCTCCTTATCATACTACCGATTATAGCCGCGACAGTTTTGTTTGTTTCAATGCTCTCTCTGCTGTGGATGCTATATTCCTCTAAGACGAAAAAAAAGGAGGAGCAAAGAAGTTTGTCAAAATTGTCATCAACTCCTCTAAAGGGTTTGCCTCAAAATATATCCTATGATGATATTAGGCTTGCTACAAATAATTTTTCTTCTACAAACTTGGTTGGAAAAGGAGGCTTTGGTTCTGTTTACAAGGGAGTGTTCAACCTTAACACTTACGAAAGTCAAACCACCACACTTGCTGTTAAAGTTTTTGACCTGCAACAAAGCAAAGCCTGTCAGAGTTTTAGTGCAGAATGTGAAACTTTGAAAAATGTTAGGCATCGGAATCTTGTCAAGGTGATCACTTCTTGTTCTAGTACTGATCACAAAGGGGATGATTTTAAGGCCCTTGTTATGCATTTCATTCCTAATGGTAATTTGGAGATGAGTTTATACCCAGAAGATCTCGAGTCGGGATCTTCACTAACCTTGTTGCAGAGGTTAAACATTGCTATTGATGTTGCATCTGCCCTGGACTACTTGCACCGTGATTGTGATCCACCAATAGTCCATTGTGATTTGAAACCACTCAATGTCCTACTAGATGAAGATATGGTTGCACATGTAGCCGATTTTGGATTGGCAAGGTTTCTCCCTCAAAATGCATCTGAGAAACGCAGCAGCACTCGAGAACTGAATGGATCAATCGGCTATATTGCCCCAGAATATGGTCTAGGTGGCAAGGCTTCAACTAGTGGTGATGTGTACAGTTTTGGGATCCTACTGCTAGAGATGTTGATAGCCAAAAAACCAACAGATGAAATGTTCAAAGAAGGATTAAACATGGACAACTTTGTATTAGAAATGGATGCAAAGCAATTACTGGATGTTGTTGATCAAAGGCTTATGAACCATTTTGAATATTCGATACAAAGTTTCAGCAGCGACAGTCATAGTGGTAGATCCGGCGACATCAGCTATAGTGATGGTAGTAAGACATACTGGACTCACAATGCGGAGGAGTGCATAGCTGCTGCAATGAGAATCGGCTTGTCATGTGTAGCACATCATCCCAAAGATAGGTTGACAATGAGAGAAGCCTTATCAAAGTTGCATGGAATTAAGCAGTCTGTTCTTGGCTTGTGA 3096 0.3892 MIHVHHILFLCFLLHNFHFIICISNNTDKDILLSFKLQLTDPNNVLSNWTTDSNHCTWYGVNCSKAGERVQSLTLSGLGLSGKLPSNLSNLTSLLSLDLSNNTFHGQIPSTFGNLISLETLSLGENKFIGEIPIEFGNLTLLTVIQLARNNLSGTLPPQLGQLHNLQSLDFSVNNLTGEIPSTFGNLISLESLSMARNKFVGEIPIELANLRNLSTLQLSENNFSGKFPTSIFLNLSSLVFLSLTLNNLSGELPQNIGNALPNLTTLAIATNRFDGVIPNSISNSSHLQTIDLSNNRFHGPIPLFNNLKNLTILTLANNFLTSTTSLNLQFFDSLRNSTQLQILKVNYNNLTGELPNSVAYLSSNLQQFCVSNNQLNGSIPKGMKKFQNLTSFSFEWNNFTGEFPIELGTLKKLQQLWIHQNRLFGEIPDIFGNFTNLYQIAMRNNQFTGRIPASIGRCKSLNYLDLGMNRLVGVIPMEIFQLSGLTTLYLRGNSLNGSLPPVLNMEQLEFMIVSDNKLSGNISNIQANGLKVLQMARNKFGGSIPNSLGDSAFLETLDLSSNNLSGSIPENLEELKYLVSLNLSFNKLEGEVPMKGVFMNLSQVDLQGNNRLCGLNNQVMQKLGVTLCVAGKKNKRNNLLLIILPIIAATVLFVSMLSLLWMLYSSKTKKKEEQRSLSKLSSTPLKGLPQNISYDDIRLATNNFSSTNLVGKGGFGSVYKGVFNLNTYESQTTTLAVKVFDLQQSKACQSFSAECETLKNVRHRNLVKVITSCSSTDHKGDDFKALVMHFIPNGNLEMSLYPEDLESGSSLTLLQRLNIAIDVASALDYLHRDCDPPIVHCDLKPLNVLLDEDMVAHVADFGLARFLPQNASEKRSSTRELNGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMLIAKKPTDEMFKEGLNMDNFVLEMDAKQLLDVVDQRLMNHFEYSIQSFSSDSHSGRSGDISYSDGSKTYWTHNAEECIAAAMRIGLSCVAHHPKDRLTMREALSKLHGIKQSVLGL 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi192g00027 1031 Gene3D Phosphorylase Kinase; domain 1 687 791 - -
Vivi192g00027 1031 Gene3D Ribonuclease Inhibitor 142 234 IPR032675 -
Vivi192g00027 1031 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 792 1030 - -
Vivi192g00027 1031 FunFam Leucine-rich repeat receptor-like protein kinase TDR 65 335 - -
Vivi192g00027 1031 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Vivi192g00027 1031 Gene3D Ribonuclease Inhibitor 235 623 IPR032675 -
Vivi192g00027 1031 Pfam Protein tyrosine and serine/threonine kinase 709 927 IPR001245 GO:0004672|GO:0006468
Vivi192g00027 1031 ProSitePatterns Protein kinases ATP-binding region signature. 711 739 IPR017441 GO:0005524
Vivi192g00027 1031 PANTHER OS04G0122200 PROTEIN 202 1025 - -
Vivi192g00027 1031 Pfam Leucine Rich Repeat 555 576 IPR001611 GO:0005515
Vivi192g00027 1031 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515
Vivi192g00027 1031 Pfam Leucine rich repeat 437 496 IPR001611 GO:0005515
Vivi192g00027 1031 SUPERFAMILY L domain-like 49 336 - -
Vivi192g00027 1031 SUPERFAMILY Protein kinase-like (PK-like) 679 1021 IPR011009 -
Vivi192g00027 1031 SMART serkin_6 705 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi192g00027 1031 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Vivi192g00027 1031 SUPERFAMILY L domain-like 364 618 - -
Vivi192g00027 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Vivi192g00027 1031 ProSiteProfiles Protein kinase domain profile. 705 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi192g00027 1031 FunFam LRR receptor-like serine/threonine-protein kinase EFR 676 791 - -
Vivi192g00027 1031 SMART LRR_sd22_2 411 437 - -
Vivi192g00027 1031 SMART LRR_sd22_2 308 329 - -
Vivi192g00027 1031 SMART LRR_sd22_2 363 392 - -
Vivi192g00027 1031 SMART LRR_sd22_2 163 189 - -
Vivi192g00027 1031 SMART LRR_sd22_2 483 511 - -
Vivi192g00027 1031 SMART LRR_sd22_2 552 575 - -
Vivi192g00027 1031 ProSiteProfiles Leucine-rich repeat profile. 554 577 IPR001611 GO:0005515
Vivi192g00027 1031 FunFam Inactive leucine-rich repeat receptor-like protein kinase 336 624 - -
Vivi192g00027 1031 SMART LRR_typ_2 139 163 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 411 434 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 115 138 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 483 507 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 553 576 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 261 284 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 308 334 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 211 235 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 236 260 IPR003591 -
Vivi192g00027 1031 SMART LRR_typ_2 91 114 IPR003591 -
Vivi192g00027 1031 Gene3D Transferase(Phosphotransferase) domain 1 792 1029 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi192g00027 24 1026 Receptor kinase-like Gene Family AT3G47570 40.628 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi192g00027 PK_Tyr_Ser-Thr 3.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi192g00027 - - mtr:11428205 1500.34