Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi192g00022 ATGACCCATATACAACATATTTTGCTTCTATGTTTCCTACTTCATAATTTTCACTTCATTATTTGCAACAACAATAACACAGACAGAGATATCCTTCTATCTTTCAAATTACAGCTAATTGATCCTAACAGTGCTTTGTCCAGTTGGAGACAAGATTCTAATCATTGTACATGGTATGGAGTCAACTGTTCCAAAGTTGGTGAAAGAGTTCAGTCTCTCACCTTATCAGGACTTAGTCTCTATGGTAAACTACCTTCTAATCTCTCAAACCTCACTTACCTTCATTCACTTGACCTTTCTAAGAACAATTTTCATGGCCAAATTCCTATCCAATTTGCTCATTTCACACTCCTCAATGTCATTCAATTAGCTTTCAACAATCTCTCAGGTTCACTTCCACCACAATTGGGTCAACTTCATAATCTAGTAAGTTTAGATTTTTCTGTCAATAATCTCACAGGAGAAATCCCTTCAACTTTTGGCAATCTCTTTTCTCTTAAGAATCTTTCTTTGGCAAGGAACAAGTTTGCAGGTGAGATTCCAATTGAATTGGCCAATCTCCGTAATCTTTCAAGACTTCAACTCTCAGAAAACAATTTCACTGGCAAGTTTCCTACTTCTATTTTCTTCAACCTCTCTTCCTTAGTTTTCTTATCCCTCACACTGAACAATCTATCAGGCGAGTTGCCGCAAGATTTCGGCCACGCCTTTCCAAATTTAATCACACTTGCTCTTGCAACCAATAGATTTGAAGGGGTGATTCCAAATTCTATATCCAATTCATCACATCTTCAAATTATTGATCTTGCTAACAATAGATTTCATGGACCAATACCTCTTTTCAACAACCTGAAAAACCTCACTCATTTGACACTAGGTAATAACTATCTCACTTCCACAACATCATTGAATTTAAAGTTCTTTGATTCGCTTAGAAACTCCACTCAGTTGCAAATTCTTATGGTCAATGATAACAACTTGACCGGTGAACTTCCAAATTCTGTTGCCTATCTTTCAGGCAATCTACAACAGTTCTGTGTTTCTAATAATCAGCTAAATGGAAGTGTTCCTAAAGGAATGAACAAGTTTCAAAATCTCATATCCTTCTCTTTTGAACAGAATTATTTCACTGGCGAGTTACCATTAGAATTAGGATCACTCAAGAATTTGGAGCAGCTATTGATATACCAAAACAGATTGTCTGGTGAAATTCCTGATATATTTGGCAATTTAACAAATCTGTATATTCTTGCAATAGGAAACAACCAATTCTCAGGTAGAATTCACCCTAGCATTGGAAAATGCAAGAGATTGACTCTTCTTGACTTGGAAATGAATAAGCTTTCCGGTGTCATACCAATGGAGATTTTTCAACTCTCTGGATTGACAACTTTGTACTTACACGGAAACTCTTTGAATGGATCGCTTCCTCTTGAATTCAAGATGGAGCAGTTAGAGACCATGATTGTTTCAGACAACAAGCTGTCGGGGAACATTCCTAAAATCGAAGTAAACGTCTTGAAGACACTTAAGATGGCAAGAAATAATTTTAGTGGCTCAATTCCAAGTAGTCTAGGAGATTTAGCATCCCTTGTGACCTTGGATTTATCATCAAACAATCTCACTGGTCCAATTCCTGAGAGCTTAGAAAAGCTTGAGTATATGGTGAGGTTAAATTTGTCTTTCAACAAATTGGAAGGAGAGGTTCCTATGAAAGGTGTTTTTATGAACCTAAGCCAGGTTGATCTCCAAGGTAACAACAGATTATGCGGCCTTAACAATCAAGTTACGCACAAGTTGGGAGTCACTTTGTGTGTTGCAGGTAAAAAAAACAAGAGAAACATTTTACTCCCTATCATACTAGGGATTATAGGTGCGATTGTTTTGTTCGCTTCAATGCTCTATCTGCTGTGGCTGCTAATTTCCTTAAAGAAACACGAGGAGGAGAATAGAAGTTTGTCATCAACTCCTCTTAAGGGTTTGCCTCAAAATATATCCTATGGTGATATTAGGCTTGCTACAAACAATTTTTCTTCCACAAACTTGGTTGGAAAAGGAGGCTTTGGTTCTGTTTACAAGGGTGTGTTCAACACCAGCACTTATGAAAGTCAAACCACCATACTTGCTGTTAAAGTTCTTGACCTGCAACAAAGAAAAGCCTCTCAGAGTTTTAGTGCAGAATGCGAAGCTTTGAAAAACATTAGGCATCGGAATCTTGTCAAGGTGATCACTTCTTGCTCTAGCACTGATTACAAGGGGGATGATTTTAAGGCACTGGTTATGCAATTCATGCCTAATGGTAATCTAGAGATGAATTTATACCCAGAAGATCTCGAGTCAGGATCTTTACTAACCTTGTTGCAAAGGTTGAATATTGCTATTGATGTAGCTTCTGCCATGGACTACTTGCACCATGATTGTGATCCACCAATAGTCCATTGTGATCTTAAACCTGCCAATGTCCTGCTAGATGAAGATATGGTTGCACATGTAGCAGATTTTGGGTTGGCAAGGTTTCTCTCTCAAAATCCATCAGAGAAACATAGCAGCAGCACGCTGGAACTGAAAGGGTCAATTGGCTATATTGCCCCAGAATATGGTCTAGGAGGCAAGGCTTCAACTAGTGGTGACGTGTACAGTTTTGGGATCCTACTACTAGAGATGTTGATAGCCAAAAAACCAACAGATGAAATGTTCAAAGAAGGATTAAACATGAACAATTTTGAGAAGAAATTACTGAATATTGTTGATCAAAGGCTTATTAACCTTTATGAATATTCAACACAAAACTTTAGCAGCGATAGTCATAGTGGTGAATCCAGCGACATCAGCTATAGTGATCGTAGCAACACATACAAAGCTGAGGAGTGCATAGCTGCTGCAATGAGAATTGGCTTGTCATGTGTAGCGCATCATCCCAAAGATAGGTGGACCATGAGAGAAGCCTTGACAAAATTACATGGAATTAAGCACTTTATTCTAGGCTTGTAA 2991 0.3801 MTHIQHILLLCFLLHNFHFIICNNNNTDRDILLSFKLQLIDPNSALSSWRQDSNHCTWYGVNCSKVGERVQSLTLSGLSLYGKLPSNLSNLTYLHSLDLSKNNFHGQIPIQFAHFTLLNVIQLAFNNLSGSLPPQLGQLHNLVSLDFSVNNLTGEIPSTFGNLFSLKNLSLARNKFAGEIPIELANLRNLSRLQLSENNFTGKFPTSIFFNLSSLVFLSLTLNNLSGELPQDFGHAFPNLITLALATNRFEGVIPNSISNSSHLQIIDLANNRFHGPIPLFNNLKNLTHLTLGNNYLTSTTSLNLKFFDSLRNSTQLQILMVNDNNLTGELPNSVAYLSGNLQQFCVSNNQLNGSVPKGMNKFQNLISFSFEQNYFTGELPLELGSLKNLEQLLIYQNRLSGEIPDIFGNLTNLYILAIGNNQFSGRIHPSIGKCKRLTLLDLEMNKLSGVIPMEIFQLSGLTTLYLHGNSLNGSLPLEFKMEQLETMIVSDNKLSGNIPKIEVNVLKTLKMARNNFSGSIPSSLGDLASLVTLDLSSNNLTGPIPESLEKLEYMVRLNLSFNKLEGEVPMKGVFMNLSQVDLQGNNRLCGLNNQVTHKLGVTLCVAGKKNKRNILLPIILGIIGAIVLFASMLYLLWLLISLKKHEEENRSLSSTPLKGLPQNISYGDIRLATNNFSSTNLVGKGGFGSVYKGVFNTSTYESQTTILAVKVLDLQQRKASQSFSAECEALKNIRHRNLVKVITSCSSTDYKGDDFKALVMQFMPNGNLEMNLYPEDLESGSLLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPANVLLDEDMVAHVADFGLARFLSQNPSEKHSSSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMLIAKKPTDEMFKEGLNMNNFEKKLLNIVDQRLINLYEYSTQNFSSDSHSGESSDISYSDRSNTYKAEECIAAAMRIGLSCVAHHPKDRWTMREALTKLHGIKHFILGL 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi192g00022 996 SUPERFAMILY L domain-like 340 593 - -
Vivi192g00022 996 ProSitePatterns Protein kinases ATP-binding region signature. 683 711 IPR017441 GO:0005524
Vivi192g00022 996 SMART serkin_6 677 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi192g00022 996 PANTHER LEUCINE RICH REPEAT KINASE 2 310 990 - -
Vivi192g00022 996 Gene3D Ribonuclease Inhibitor 181 281 IPR032675 -
Vivi192g00022 996 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Vivi192g00022 996 SMART LRR_typ_2 411 435 IPR003591 -
Vivi192g00022 996 SMART LRR_typ_2 139 162 IPR003591 -
Vivi192g00022 996 SMART LRR_typ_2 284 310 IPR003591 -
Vivi192g00022 996 SMART LRR_typ_2 387 410 IPR003591 -
Vivi192g00022 996 SMART LRR_typ_2 212 235 IPR003591 -
Vivi192g00022 996 SMART LRR_typ_2 528 552 IPR003591 -
Vivi192g00022 996 SMART LRR_typ_2 459 482 IPR003591 -
Vivi192g00022 996 SMART LRR_typ_2 187 211 IPR003591 -
Vivi192g00022 996 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 64 311 - -
Vivi192g00022 996 Gene3D Phosphorylase Kinase; domain 1 659 763 - -
Vivi192g00022 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Vivi192g00022 996 FunFam Inactive leucine-rich repeat receptor-like protein kinase 312 600 - -
Vivi192g00022 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 648 763 - -
Vivi192g00022 996 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Vivi192g00022 996 Gene3D Transferase(Phosphotransferase) domain 1 764 992 - -
Vivi192g00022 996 Pfam Protein tyrosine and serine/threonine kinase 681 903 IPR001245 GO:0004672|GO:0006468
Vivi192g00022 996 SUPERFAMILY L domain-like 25 300 - -
Vivi192g00022 996 ProSiteProfiles Protein kinase domain profile. 677 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi192g00022 996 Gene3D Ribonuclease Inhibitor 282 599 IPR032675 -
Vivi192g00022 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 764 995 - -
Vivi192g00022 996 Pfam Leucine rich repeat 412 472 IPR001611 GO:0005515
Vivi192g00022 996 Pfam Leucine rich repeat 507 565 IPR001611 GO:0005515
Vivi192g00022 996 SUPERFAMILY Protein kinase-like (PK-like) 654 986 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi192g00022 25 991 Receptor kinase-like Gene Family AT3G47570 41.560 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi192g00022 PK_Tyr_Ser-Thr 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi192g00022 - - mtr:11428205 1629.77