Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi192g00009 ATGGGTCATTGCTGCAGCAAAAACACTGCAGTCGACAGCGACACCGTCGCCGATCACAACCTCAAATCATCTAACCACGATGTATCACAAACTTCCCACCCTGCCGGAAACTCTGTCTCCGGCGTCAGTGATGCTACTCCGGGAAGGCAAACCCCGGCGACATCGTTTTCCACTAGTCCTTTCAATAGTCCTCTTCCTGCAGGTGTGGCGCCGTCACCGGCTGCCAGGACTCCTGGAAGGAAATTCAGGTGGCCGCTTCCTCCGCCGTCTCCGGCAAAGCCGATAATGGCGGCTTTGATGCGGAGGCAGGGGAAGACGAAACCGAAAGATGGACCGATACCTGAGGAACAAGGGGAAGGTGGAGAGGGAGAGAGGACGTTGGATAAGAGCTTTGGATATGGGAAGAATTTTGGGGCGAAGTTTGAGCTTGGGAAGGAAGTTGGACGAGGGCATTTTGGTCATACTTGTTGGGCTAAAGGGAAGAAAGGTGAACTTAAGGGAGTATCAGTGGCTGTCAAAATCATAACCAAAGCTAAGATGACCTCAGCAATTGCAATTGAAGATGTGAGAAGGGAGGTGAAAATGTTGAAAGCCTTGTCCGGACATAGGAATTTGGTCAAGTTTTATGAAGCATTTGAGGATGCGAATAATGTCTACATTGTGATGGAGTTATGCGAGGGTGGAGAATTACTGGACAGAATTCTAGATAGAGGTGGAAGATACACAGAGGAGGATGCCAAAGTTATTCTTCTACAAATTCTTAATGTAGTTGCCTTTTGTCATCTTCAAGGAGTTGTTCATCGCGATCTAAAACCAGAGAATTTTCTTTTTCTCTCAAAAGATGAGGATGCTGTTCTGAAAGTTATTGATTTTGGTCTATCTGATTTTGTCAGGCCAGATCAACGCCTTAATGATATTGTTGGTAGTGCCTATTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGGAGACTTATGGAGTATTGGAGTTATATCGTACATATTGTTATGTGGAAGTAGACCGTTTTGGGCGCGGACTGAATCAGGAATCTTCCGGTCTGTGTTAAGAGCAAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTGAAGAGACTTTTGAACAAGGACCATCGGAAAAGGATGACAGCTGCTCAAGCTCTATCTCACCCATGGTTGAGAGATGAAAGAAATGCCATTCCTTTAGATATTCTGATTTACAAGTTAGTCAAGACATACGTGCGTGCCTCGCCTTTGAAACGTTCGGCATTGAAGGCTCTCTCAAGAGCATTGCCAGAGGATGAGGTTACCTACCTTACAGCACAATTTAGCCTCTTGGAACCTAAAGATGGTTGCGTTTCGCTTGAGAATTTCAGAGTTGCTCTCATGAAAAATGCAACTGATGCCATGCGGGAAGCAAGGGTCCCTGACATTCTAAATTTGATGGATCCACTCTCCTATAAAAAACTGGACTTCGAAGAGTTTTGTGCTGCCGCAATCAGTGTATACCAGCTTGAAGTTCATCCAGAATGGGATAAAATTTCCACCACAGCATTTGATTATTTTGACGAGGCAGGGAACCGTGTCATTTCACTCGAGGAGTTGGCACAGGAGATGAATTTGGGTCCATCTGCTTATTCTTTAATGGGTGACTGGATCAGAAAATCTGATGGAAAACTCAGCATGGTCGGATATACAAAATATTTGCACGGTGTCACAATTCGTACAAATACAAGACACCGATAG 1776 0.4488 MGHCCSKNTAVDSDTVADHNLKSSNHDVSQTSHPAGNSVSGVSDATPGRQTPATSFSTSPFNSPLPAGVAPSPAARTPGRKFRWPLPPPSPAKPIMAALMRRQGKTKPKDGPIPEEQGEGGEGERTLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGELKGVSVAVKIITKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYEAFEDANNVYIVMELCEGGELLDRILDRGGRYTEEDAKVILLQILNVVAFCHLQGVVHRDLKPENFLFLSKDEDAVLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALSHPWLRDERNAIPLDILIYKLVKTYVRASPLKRSALKALSRALPEDEVTYLTAQFSLLEPKDGCVSLENFRVALMKNATDAMREARVPDILNLMDPLSYKKLDFEEFCAAAISVYQLEVHPEWDKISTTAFDYFDEAGNRVISLEELAQEMNLGPSAYSLMGDWIRKSDGKLSMVGYTKYLHGVTIRTNTRHR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi192g00009 591 Gene3D - 423 551 - -
Vivi192g00009 591 Pfam Protein kinase domain 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi192g00009 591 FunFam CDPK-related kinase 1 439 510 - -
Vivi192g00009 591 FunFam CDPK-related kinase 1 134 229 - -
Vivi192g00009 591 Gene3D - 442 510 - -
Vivi192g00009 591 ProSitePatterns Protein kinases ATP-binding region signature. 147 173 IPR017441 GO:0005524
Vivi192g00009 591 MobiDBLite consensus disorder prediction 8 65 - -
Vivi192g00009 591 SUPERFAMILY EF-hand 436 580 IPR011992 -
Vivi192g00009 591 Gene3D Phosphorylase Kinase; domain 1 135 230 - -
Vivi192g00009 591 FunFam Calcium-dependent protein kinase SK5 313 408 - -
Vivi192g00009 591 SUPERFAMILY Protein kinase-like (PK-like) 140 428 IPR011009 -
Vivi192g00009 591 CDD STKc_CAMK 140 402 - -
Vivi192g00009 591 MobiDBLite consensus disorder prediction 1 129 - -
Vivi192g00009 591 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 564 - -
Vivi192g00009 591 Gene3D Transferase(Phosphotransferase) domain 1 231 422 - -
Vivi192g00009 591 ProSiteProfiles Protein kinase domain profile. 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi192g00009 591 MobiDBLite consensus disorder prediction 103 129 - -
Vivi192g00009 591 FunFam CDPK-related kinase 3 133 305 - -
Vivi192g00009 591 SMART serkin_6 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi192g00009 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi192g00009 1 590 EF-hand Containing Proteins AT3G50530 56.875 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi192g00009 Pkinase 2.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi192g00009 K13412 - gmx:100803631 1021.15