Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi190g00029 ATGCTAAATATGAAAACCGAGTTCATGGCTCTATGGGACGGATTCACCACCAACAAGAATGCTCGAGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGACGAAGCAATACTCCGGCGACTTCCTCAAGCTTTCGAAATTGGATATCCAAGCCGGAAAGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGGAGAAAGTATCGAAAACAACATAGATTTCAATCATATAGCGGGATTATGTAAGGGTTACACTGGTTCAGATCTATTCGATCTTTGCAAGAAGGCTGCATATTTTCCTGTTAGAGAACTACTGGATAATGAAAAGAGAGGGAATCAAACTCATGAACCTAGACCATTATCGCAATTAGATTTGGAGAAGGCCCTTGCCACTTCACAGAAGACAACGGTTGCTGCAAATGAATACGATAGAATGAACCAACAGTCATCATCAAGACGGACGTTTCCCGACGAGGGCGATTTTGATGTTCAAGCTGCAATCAAGGAAATCTCTAAGCTTATGGGTTCCCACATGATTAACCTCCAATTAGATTCCCAGGATGCTTAA 573 0.4206 MLNMKTEFMALWDGFTTNKNARVMVLAATNRPSELDEAILRRLPQAFEIGYPSRKERAEILKVILKGESIENNIDFNHIAGLCKGYTGSDLFDLCKKAAYFPVRELLDNEKRGNQTHEPRPLSQLDLEKALATSQKTTVAANEYDRMNQQSSSRRTFPDEGDFDVQAAIKEISKLMGSHMINLQLDSQDA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi190g00029 190 Pfam AAA+ lid domain 73 108 IPR041569 -
Vivi190g00029 190 ProSitePatterns AAA-protein family signature. 23 42 IPR003960 GO:0005524|GO:0016887
Vivi190g00029 190 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 150 - -
Vivi190g00029 190 Pfam ATPase family associated with various cellular activities (AAA) 6 50 IPR003959 GO:0005524|GO:0016887
Vivi190g00029 190 Gene3D - 52 134 - -
Vivi190g00029 190 Gene3D - 3 140 IPR027417 -
Vivi190g00029 190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 110 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi190g00029 6 111 Calmodulin-binding Proteins AT3G56690 33.333 2.90e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi190g00029 K22530 - gmx:100796908 289.271