Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00168 ATGGGTGCTTCAGGAAAATGGTTCAAATCACTTCTTTCTCATAAAAAAATCTCATCCTCAACCACAACATCTGATCAAGAGAAGAAGATTAATGGTGATAACAAGAGTGGTAGTAGTGCTAAGAAGAAATGGAAGCTATGGAAGTCATCTTCAGAAGGATCTACTTCTTCAAGTATGAAGAAGAGTGGTGGTGGTACAGCTTCTGTGTGTGACTCTTCGCTTACTGCTGCTGCGGTTGCTGTCGTGGTTCGAGCTCAACCTAAGGATTTTAACCTCATCAGGCAGGAATGGGCGGCTATTCGAATTCAGGCTCTTTTTCGAGCTTTCTTGGCTAGAAGAGCTTTGAGGGCATTGAGGGCAGTGGTGAGGCTGCAAGCTATATTTAGAGGCAGGCAAGTGCGAAAACAAGCCGCGGTTACTCTGAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGTGTAAGGGCTAGGAATGTCAGGAATTCTCCAGAAGGAAAAGCAGTTCAGCAGTTATTAGACGACCATCGCAACCAAGCTGATTCCGCTAAACTTCAAGGATGGTGTGAAATTCCTGGAACTGCAGATGAAGTTAAAGCAAAGCTAAAACTGAGGCAAGAAGGAGCAATCAAGAGGGATCGCGCAATGGCATACTCTCTATCGGCACAGTCAAGAATGAGTGCTAGTCCAAACTCAAAATCAGTGACTCCTCTCAAGCATCATCACAATCGCGACAACAAGAGCTTAGGAAACGGCTTGTTAGAACGCTGGATGGCGAACAAACCATGGGAGAGTCCAATGTCAATCAGGAAGAGTGAAGAACTTGTTCCTACTTTTCAAACAAGAAGGAATGGTATGACAACTAGGATTTCAGCTCTTAAAATCAGTCACCAAACTCCATCCTCTTCCACCATAAGCTCCGAATACATGAACGACGATAGCGCTATATCATCTTCATGTACATCTGGATCCCCTTTGCCATTCAGCAACAATACTGTTATGGTGGAAGCAAGAGAGGAAAAAGATGTACCAAGCTACATGAGTTTGACAGAATCAACTAAGGCTAAACTCAAAGCTTACAGAAGTTCTTCGCAGAATTCTAAGAGACTCACAATGGATGATTGTCTGTCTCATAACACAAATTCAACATTTCTGAATGGATATAACAGTATAAGCAGTTCTGGTTCTGACCCTTCGGTTAATATATGGAAGGATCGTTGTGCAACGCCTCTAAGAGCAAGTTACTATCAAAAACGATACGGAGGAAGATAG 1269 0.4342 MGASGKWFKSLLSHKKISSSTTTSDQEKKINGDNKSGSSAKKKWKLWKSSSEGSTSSSMKKSGGGTASVCDSSLTAAAVAVVVRAQPKDFNLIRQEWAAIRIQALFRAFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQQLLDDHRNQADSAKLQGWCEIPGTADEVKAKLKLRQEGAIKRDRAMAYSLSAQSRMSASPNSKSVTPLKHHHNRDNKSLGNGLLERWMANKPWESPMSIRKSEELVPTFQTRRNGMTTRISALKISHQTPSSSTISSEYMNDDSAISSSCTSGSPLPFSNNTVMVEAREEKDVPSYMSLTESTKAKLKAYRSSSQNSKRLTMDDCLSHNTNSTFLNGYNSISSSGSDPSVNIWKDRCATPLRASYYQKRYGGR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00168 422 SMART iq_5 117 138 IPR000048 GO:0005515
Vivi18g00168 422 SMART iq_5 94 116 IPR000048 GO:0005515
Vivi18g00168 422 MobiDBLite consensus disorder prediction 49 64 - -
Vivi18g00168 422 Pfam Protein of unknown function (DUF4005) 312 382 IPR025064 -
Vivi18g00168 422 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Vivi18g00168 422 MobiDBLite consensus disorder prediction 221 248 - -
Vivi18g00168 422 Gene3D - 92 146 - -
Vivi18g00168 422 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Vivi18g00168 422 MobiDBLite consensus disorder prediction 17 64 - -
Vivi18g00168 422 Pfam IQ calmodulin-binding motif 119 136 IPR000048 GO:0005515
Vivi18g00168 422 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Vivi18g00168 422 PANTHER IQ-DOMAIN 5-RELATED 1 396 - -
Vivi18g00168 422 MobiDBLite consensus disorder prediction 221 235 - -
Vivi18g00168 422 MobiDBLite consensus disorder prediction 28 48 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00168 1 404 IQD Protein Family AT1G72670 46.512 3.21e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi18g00168 - - tpra:123894121 555.829