Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00165 ATGGGACATCACTCTTGCTGCAACAAACAGAAAGTTAAAAGAGGTTTATGGTCACCTGAAGAAGATGAAAAACTCATCAACTACATCACTACTTATGGACATGGCTGCTGGAGTTCTGTGCCTAAGCTTGCTGGTTTGCAAAGATGTGGAAAAAGCTGCAGATTAAGATGGATTAATTATTTAAGACCTGATTTGAAACGTGGAAGCTTTTCTCCTCAAGAAGCTGCTCTTATCATTGAACTTCATACCATTCTTGGCAACAGGTGGGCACAGATAGCAAAACATTTACCAGGAAGAACTGATAATGAAGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAACTGCTTTCACATGATTTTGTTCCTTCTTTAACCACATTTTCTGATCATATTCACTGTCCTAGAAATGAAACTTTCTTCCCTTTGTTAAATGACAATCCTATCCTTAATAACAACTCTCATCATCATCAATATCACTTAGATCATCATCTTTACTTTCCCATCAATCTTCCATCTCCAATCCTACAAGATCAAAATGACCATATCAAGAATATTGATATCAACAACATTTTGAATGCCAATTTTCATAATCCATCTTTGCCAGAAACACTACCTTCTTCCAATAATCTTGTTTCATCTTCTTATGACCAATTTGATACTTGGTCATTCATTCATCATCTCAATCCAAATCTTCACCAAAACTATAATATTGTTGAGAATTTCATCAACAATAATAATCCAAACACAATATGGCAACATCAACATCAGCAGCAACAGCAACCGCAACCGCAGCAACAGCAACAACACTATGAGAGTAGTAGTCATCATTTGGTGGAACTTGATAATTCTATTGTCCCAAAAGTTTGTGAAATTGAAACCATCAAGGATAATTTTGTTTCTAGCATCCCATTTTCTTCTTCTGATTCACAACATCATCATCATCATGATCTTATCCATCAAATTGTGGCTGCAGAAGTTAATAACAATGATGTTCAAGCTGTGGAGTATAATAATATCATGGATGCTCTCATCATGTCATCCTCATTACCATCCTCAACAACAACAACAATAACATCTTCATCATCACCACCACTATCATTCTACCAAGCACCAGAAAAAATTCTCGCAAAACCTATCCTTCCTTCAACTTGGGAGTCATCATCATCATGA 1173 0.3581 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHTILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDFVPSLTTFSDHIHCPRNETFFPLLNDNPILNNNSHHHQYHLDHHLYFPINLPSPILQDQNDHIKNIDINNILNANFHNPSLPETLPSSNNLVSSSYDQFDTWSFIHHLNPNLHQNYNIVENFINNNNPNTIWQHQHQQQQQPQPQQQQQHYESSSHHLVELDNSIVPKVCEIETIKDNFVSSIPFSSSDSQHHHHHDLIHQIVAAEVNNNDVQAVEYNNIMDALIMSSSLPSSTTTTITSSSSPPLSFYQAPEKILAKPILPSTWESSSS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00165 390 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vivi18g00165 390 MobiDBLite consensus disorder prediction 247 276 - -
Vivi18g00165 390 FunFam Myb transcription factor 69 116 - -
Vivi18g00165 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vivi18g00165 390 PANTHER MYB DOMAIN PROTEIN 55 1 293 - -
Vivi18g00165 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vivi18g00165 390 CDD SANT 17 61 IPR001005 -
Vivi18g00165 390 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Vivi18g00165 390 Gene3D - 11 67 - -
Vivi18g00165 390 Gene3D - 69 116 - -
Vivi18g00165 390 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Vivi18g00165 390 SMART sant 13 63 IPR001005 -
Vivi18g00165 390 SMART sant 66 114 IPR001005 -
Vivi18g00165 390 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vivi18g00165 390 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Vivi18g00165 390 CDD SANT 69 109 IPR001005 -
Vivi18g00165 390 FunFam MYB transcription factor 6 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00165 1 118 MYB Transcription Factor Family AT3G13890 95.763 7.69e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi18g00165 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi18g00165 K09422 - gmx:102662609 343.199