Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00163 ATGTTAAGTAGGATGTCCTATGAAGGCTTGGATGACCAGAGGATGCATTTAGTTTTGAGGATGAAAGAACTTGCACATGGGATTGTTGATAAGCAACCTAGAGTTGCAATAACTAGGTCTGAGATACTTGAGGACCAAGTTTGCTTTGTGGATGAAGGGGCAAGAGACAGTCCTGTGGTTGATTCGATCAAGATCAGCAACGGGGATATTCTAATTGATGAGGCACAAAGCATGATGCATGAGGATGAGATGTTAGACGTGGACCAGGTTTTAGGATTTGAAAATGGGATAGATGAAGTAGAAGAGTCTCTGCTGTCATCGTGCTTTCAGCAATTTCTTCTGTGGCCTTCCGATGATTGTGTCACCTTTGAGTGGGTTCAGGACATGATGTTCATCCTTGAGAAGGCTTCACAGAAGACATTGCCAACTGAATTCTGTCATGTTGTGCAGACCTTTGTGGTGTTCAAATTGATAGATGCTGCTTGTAATGTTTTACGTAAAGAACCAAACTGTGTGGAGATTAATTGCCTCGGAGAAGATTCTAGAGTCATCGTTGTAGGTGATATACATGGGCAGTTTCACGATTTATTGTTTCTTTTGAAGCATGCGGGAATGCCTTCTGAGAACCAGTTTTATGTTTTCAATGGTAATTATGTTGATGAAGGAGCTTGGGGCATTGAGGTGTTCTTGGTCTTGCTAGCATGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACTGAACAATATGGTTTTAAGATAGAGGTACAGACCAAATATGGCAATCAAAGTGAAGACGTGTACAATAAATTCCTAGAGTGTTTCAAGGAACTTCCATTAGCGTCAGTTATTGCCAACCGTGTTTATACTACTCATGGGGGGCTTTTCCGCAGCATTCATGCTGCTACTTCCCCTTCAGAAAAGCCAAAACGGAAAATGACACAAAGGATGGACCTTGGTTCTTTAGCTGATTTATCTCAAGTTAAAAGAAGTTGCATAGATGCTCCACATGAGGGTCCTAACATACTATTGAGTGACATTCTCTGGTCAAAACCATCAAATAGCGATGGTCTGAGGGTTAATGCAGGTCAAAAATTAGGTTTATGGTACGGTCCTGATTGCACTGAGGCTTTCTTAAAGCAGCACAATTTGAAGCTGATCATCAGATCACATGAAGGACCAGATGCAAGGGCTGGTAGGGATGATTTTGGGGATATGTTGAACGGATACAGCATAGATCATGATGGCGAGTCAGGAAAGCTATATACACTTTTTAGTGCTCCAGATTACCCGCAGTTTGGGGGGACGAGGTATAACAATGAAGGAGCATATGCAATATTGAAGTCGCCAGATTTTGCAACTCCTTCCTTTCAGTCATTCAAATCAGCAGAAAGACCAATGGTGTATCCTTGTGTCGATTTTGATGCTGATGATATGGACTTGAGTCAACTTGACTCTTCTCAAATCGACATAGAGGCCTCGACCTCCACCTTTTCGGGTCCTCAAGATGCGCCGAGACCCGAATTCGACTTCGAGTCATTAGGCATATATAATGCCCCAAGTTGGAGTGTTCAGCTTCCGGATGGTTCAGGCGGTTCTCAAGTTGTGCAGGTTCCAAGAGCTCCATTGGTGGAAGGGTTGCCCCTGCCTCCTAACATAGAGGAGCCACACGCGGGTGCTTATAATTATTTGTTCGAGCTCGTTGCTGGCCTTAAACACATGATTGCAACAAGGGAGACCGAGAACAGTGCTCGTGTATCGGCTTTGCGAAGTAAAGCTAGTAAACGAAAGGAAAGAGGTCACAATTGA 1836 0.4336 MLSRMSYEGLDDQRMHLVLRMKELAHGIVDKQPRVAITRSEILEDQVCFVDEGARDSPVVDSIKISNGDILIDEAQSMMHEDEMLDVDQVLGFENGIDEVEESLLSSCFQQFLLWPSDDCVTFEWVQDMMFILEKASQKTLPTEFCHVVQTFVVFKLIDAACNVLRKEPNCVEINCLGEDSRVIVVGDIHGQFHDLLFLLKHAGMPSENQFYVFNGNYVDEGAWGIEVFLVLLAWKVLMPHRVYLLRGNHESRYCTEQYGFKIEVQTKYGNQSEDVYNKFLECFKELPLASVIANRVYTTHGGLFRSIHAATSPSEKPKRKMTQRMDLGSLADLSQVKRSCIDAPHEGPNILLSDILWSKPSNSDGLRVNAGQKLGLWYGPDCTEAFLKQHNLKLIIRSHEGPDARAGRDDFGDMLNGYSIDHDGESGKLYTLFSAPDYPQFGGTRYNNEGAYAILKSPDFATPSFQSFKSAERPMVYPCVDFDADDMDLSQLDSSQIDIEASTSTFSGPQDAPRPEFDFESLGIYNAPSWSVQLPDGSGGSQVVQVPRAPLVEGLPLPPNIEEPHAGAYNYLFELVAGLKHMIATRETENSARVSALRSKASKRKERGHN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00163 611 SMART pp2a_7 149 473 IPR006186 GO:0016787
Vivi18g00163 611 MobiDBLite consensus disorder prediction 589 611 - -
Vivi18g00163 611 PRINTS Serine/threonine phosphatase family signature 245 269 IPR006186 GO:0016787
Vivi18g00163 611 PRINTS Serine/threonine phosphatase family signature 182 209 IPR006186 GO:0016787
Vivi18g00163 611 PRINTS Serine/threonine phosphatase family signature 212 239 IPR006186 GO:0016787
Vivi18g00163 611 PRINTS Serine/threonine phosphatase family signature 429 445 IPR006186 GO:0016787
Vivi18g00163 611 PRINTS Serine/threonine phosphatase family signature 282 308 IPR006186 GO:0016787
Vivi18g00163 611 PRINTS Serine/threonine phosphatase family signature 335 362 IPR006186 GO:0016787
Vivi18g00163 611 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 68 496 - -
Vivi18g00163 611 Pfam Calcineurin-like phosphoesterase 182 403 IPR004843 GO:0016787
Vivi18g00163 611 SUPERFAMILY Metallo-dependent phosphatases 146 479 IPR029052 -
Vivi18g00163 611 ProSitePatterns Serine/threonine specific protein phosphatases signature. 246 251 IPR006186 GO:0016787
Vivi18g00163 611 Gene3D - 133 509 IPR029052 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00163 113 395 Calmodulin-binding Proteins AT5G63870 51.379 8.12e-97 296