Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00162 ATGGAGCATCACAAAGAGGTAATCAAGAATGGGTGCCATAAGATTCTTGAAGGAATCAATTCAATGTCTTGGGAGAATTTAGACGACCAGCAAGTTCATTCCTTAGTGATGATGAGAGAAATTGCGCGCGGGGTTGTTGATGAACGAGATAGAAAGGTGACTAAGAATGATGTGATTACTGCATTGCGCTACAGCATTGAGAAAATGGTGTGTGCATCTAGAGATATCATTCATATGTTAAGTAGGATGTCCTATGAAGGCTTGGATGACCAGAGGATGCATTTAGTTTTGAGGATGAAAGAACTTGCACATGGGATTGTTGATAAGCAACCTAGAGTTGCAATAACTAGGTCTGAGATACTTGAGGACCAAGTTTGCTTTGTGGATGAAGGGGCAAGAGACAGTCCTGTGGTTGATTCGATCAAGATCAGCAACGGGGATATTCTAATTGATGAGGCACAAAGCATGATGCATGAGGATGAGATGTTAGACGTGGACCAGGTTTTAGGATTTGAAAATGGGATAGATGAAGTAGAAGAGTCTCTGCTGTCATCGTGCTTTCAGCAATTTCTTCTGTGGCCTTCCGATGATTGTGTCACCTTTGAGTGGGTTCAGGACATGATGTTCATCCTTGAGAAGGCTTCACAGAAGACATTGCCAACTGAATTCTGTCATGTTGTGCAGACCTTTGTGGTGTTCAAATTGATAGATGCTGCTTGTAATGTTTTACGTAAAGAACCAAACTGTGTGGAGATTAATTGCCTCGGAGAAGATTCTAGAGTCATCGTTGTAGGTGATATACATGGGCAGTTTCACGATTTATTGTTTCTTTTGAAGCATGCGGGAATGCCTTCTGAGAACCAGTTTTATGTTTTCAATGGTAATTATGTTGATGAAGGAGCTTGGGGCATTGAGGTGTTCTTGGTCTTGCTAGCATGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACTGAACAATATGGTTTTAAGATAGAGGTACAGACCAAATATGGCAATCAAAGTGAAGACGTGTACAATAAATTCCTAGAGTGTTTCAAGGAACTTCCATTAGCGTCAGTTATTGCCAACCGTGTTTATACTACTCATGGGGGGCTTTTCCGCAGCATTCATGCTGCTACTTCCCCTTCAGAAAAGCCAAAACGGAAAATGACACAAAGGATGGACCTTGGTTCTTTAGCTGATTTATCTCAAGTTAAAAGAAGTTGCATAGATGCTCCACATGAGGGTCCTAACATACTATTGAGTGACATTCTCTGGTCAAAACCATCAAATAGCGATGGTCTGAGGGTTAATGCAGGTCAAAAATTAGGTTTATGGTACGGTCCTGATTGCACTGAGGCTTTCTTAAAGCAGCACAATTTGAAGCTGATCATCAGATCACATGAAGGACCAGATGCAAGGGCTGGTAGGGATGATTTTGGGGATATGTTGAACGGATACAGCATAGATCATGATGGCGAGTCAGGAAAGCTATATACACTTTTTAGTGCTCCAGATTACCCGCAGTTTGGGGGGACGAGGTATAACAATGAAGGAGCATATGCAATATTGAAGTCGCCAGATTTTGCAACTCCTTCCTTTCAGTCATTCAAATCAGCAGAAAGACCAATGGTGTATCCTTGTGTCGATTTTGATGCTGATGATATGGACTTGAGTCAACTTGACTCTTCTCAAATCGACATAGAGGCCTCGACCTCCACCTTTTCGGGTCCTCAAGATGCGCCGAGACCCGAATTCGACTTCGAGTCATTAGGCATATATAATGCCCCAAGTTGGAGTGTTCAGCTTCCGGATGGTTCAGGCGGTTCTCAAGTTGTGCAGGTTCCAAGAGCTCCATTGGTGGAAGGGTTGCCCCTGCCTCCTAACATAGAGGAGCCACACGCGGGTGCTTATAATTATTTGTTCGAGCTCGTTGCTGGCCTTAAACACATGATTGCAACAAGGGAGACCGAGAACAGTGCTCGTGTATCGGCTTTGCGAAGTAAAGCTAGTAAACGAAAGGAAAGAGGTCACAATTGA 2070 0.4304 MEHHKEVIKNGCHKILEGINSMSWENLDDQQVHSLVMMREIARGVVDERDRKVTKNDVITALRYSIEKMVCASRDIIHMLSRMSYEGLDDQRMHLVLRMKELAHGIVDKQPRVAITRSEILEDQVCFVDEGARDSPVVDSIKISNGDILIDEAQSMMHEDEMLDVDQVLGFENGIDEVEESLLSSCFQQFLLWPSDDCVTFEWVQDMMFILEKASQKTLPTEFCHVVQTFVVFKLIDAACNVLRKEPNCVEINCLGEDSRVIVVGDIHGQFHDLLFLLKHAGMPSENQFYVFNGNYVDEGAWGIEVFLVLLAWKVLMPHRVYLLRGNHESRYCTEQYGFKIEVQTKYGNQSEDVYNKFLECFKELPLASVIANRVYTTHGGLFRSIHAATSPSEKPKRKMTQRMDLGSLADLSQVKRSCIDAPHEGPNILLSDILWSKPSNSDGLRVNAGQKLGLWYGPDCTEAFLKQHNLKLIIRSHEGPDARAGRDDFGDMLNGYSIDHDGESGKLYTLFSAPDYPQFGGTRYNNEGAYAILKSPDFATPSFQSFKSAERPMVYPCVDFDADDMDLSQLDSSQIDIEASTSTFSGPQDAPRPEFDFESLGIYNAPSWSVQLPDGSGGSQVVQVPRAPLVEGLPLPPNIEEPHAGAYNYLFELVAGLKHMIATRETENSARVSALRSKASKRKERGHN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00162 689 ProSitePatterns Serine/threonine specific protein phosphatases signature. 324 329 IPR006186 GO:0016787
Vivi18g00162 689 SUPERFAMILY Metallo-dependent phosphatases 224 557 IPR029052 -
Vivi18g00162 689 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Vivi18g00162 689 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Vivi18g00162 689 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Vivi18g00162 689 PRINTS Serine/threonine phosphatase family signature 507 523 IPR006186 GO:0016787
Vivi18g00162 689 PRINTS Serine/threonine phosphatase family signature 413 440 IPR006186 GO:0016787
Vivi18g00162 689 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Vivi18g00162 689 MobiDBLite consensus disorder prediction 667 689 - -
Vivi18g00162 689 Gene3D - 196 583 IPR029052 -
Vivi18g00162 689 SMART pp2a_7 227 551 IPR006186 GO:0016787
Vivi18g00162 689 Pfam Calcineurin-like phosphoesterase 260 481 IPR004843 GO:0016787
Vivi18g00162 689 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 574 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00162 191 473 Calmodulin-binding Proteins AT5G63870 51.379 2.43e-96 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi18g00162 K04460 - qsa:O6P43_002566 912.138