Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00108 ATGGATAAGGAGAAATCTTTGGGTCTTGGCGGTGGTTTTCCGCCTCCGTCGGGACGTTTTACGGGTTATTCATCTACTGGGAGTGGTTTCAATGTGAAATCGGAACCTTCGTCATCGTCGTTTCCGCCGCTTGCTCCTGCTACTAGTTCAGATTCTAGTGGTTTTAGTCATGATATTAGCAGAATGTCTGTTAATCCTCCGAGGAATAGAGGTCATAGGCGTGCTCATTCGGAGATTCTGACGTTGCCTGATGATATTAGCTTTGATAGTGACCTTGGTGTGGTTGGTGGTGCTGATGGACCGTCGTTCTCGGATGATACTGAGGAGGACTTGCTGTCGATGTACCTTGATATGGATAAGTTCAATTCGTCGTCTGCAACATCGACGTTTCAAATGGGTGAGCAGTTTAATGCTGGAGCGGGATCAGGTTTGGGGCCGATTTCGGCAGGGCAGGCATCGGGAGCAGGTACTTCTTCTGGGGAAAATGTTGCTGCTGGTACCAATGAAAGGCCTAGAATTAGACACCAGCACAGCCAATCCATGGATGGGTCAACAACCATCAAACCTGAGATGTTAGTCTCGGGTTCAGAAGACTTGTCTGCAGCTGATTCAAAGAAAGCAATGTCAGCGGCAAAGCTTGCAGAACTTGCCTTGATCGACCCCAAGCGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGATACATTGCTGAGCTTGAAAGGAAAGTGCAGACACTGCAAACAGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGACTGAATTCTGAGAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAGGATGCTTTAAATGATGCGTTAAAAGAGGAAATTCAGCATTTGAAAGTACTGACTGGGCAAGCTATACCACCAAATGGAGGACCTATGATGAACTTTGCTTCTTTTGGAGGGGGACAGCAGTTCTATCCAAATAATAATAATAACAATCATGCCATGCACACTCTTTTAGCTGCACAACAGTTTCAACAGCTCCAGATTCATCCTCAGAAGCAGCAGCATCAATTTCAGCATCAATTTCAACAACATCAACAGCAAATACAGCAGCATCAAATGCAGCAGCAGCACCAGCAGCAGGAACAACAGCAACAGCAACAACAGTCAGGTGACTTGAAAATGAGAGCATCTACATCTCCCTGCCCCAAAGATACTGCTTCATCAGATGAAAATCCTTCGGCTTCCAAGGATTGTTGA 1302 0.4608 MDKEKSLGLGGGFPPPSGRFTGYSSTGSGFNVKSEPSSSSFPPLAPATSSDSSGFSHDISRMSVNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSTFQMGEQFNAGAGSGLGPISAGQASGAGTSSGENVAAGTNERPRIRHQHSQSMDGSTTIKPEMLVSGSEDLSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAIPPNGGPMMNFASFGGGQQFYPNNNNNNHAMHTLLAAQQFQQLQIHPQKQQHQFQHQFQQHQQQIQQHQMQQQHQQQEQQQQQQQSGDLKMRASTSPCPKDTASSDENPSASKDC 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00108 433 MobiDBLite consensus disorder prediction 1 74 - -
Vivi18g00108 433 MobiDBLite consensus disorder prediction 143 187 - -
Vivi18g00108 433 Coils Coil 238 307 - -
Vivi18g00108 433 CDD bZIP_plant_RF2 223 272 IPR044759 GO:0003700|GO:0006355
Vivi18g00108 433 SUPERFAMILY Leucine zipper domain 222 273 IPR046347 GO:0003700|GO:0006355
Vivi18g00108 433 MobiDBLite consensus disorder prediction 19 63 - -
Vivi18g00108 433 FunFam probable transcription factor PosF21 221 274 - -
Vivi18g00108 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 43 402 - -
Vivi18g00108 433 MobiDBLite consensus disorder prediction 363 433 - -
Vivi18g00108 433 Coils Coil 376 403 - -
Vivi18g00108 433 Pfam bZIP transcription factor 222 280 IPR004827 GO:0003700|GO:0006355
Vivi18g00108 433 MobiDBLite consensus disorder prediction 363 427 - -
Vivi18g00108 433 SMART brlzneu 218 282 IPR004827 GO:0003700|GO:0006355
Vivi18g00108 433 MobiDBLite consensus disorder prediction 151 165 - -
Vivi18g00108 433 Gene3D - 221 293 - -
Vivi18g00108 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 283 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00108 19 355 bZIP Transcription Factor Family AT1G06070 72.861 3.61e-168 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi18g00108 bZIP_1 4.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi18g00108 - - psat:127087280 656.751