Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00058 ATGGATTCTTCTAATGTAATGGCTAACACAATTCCAGAACCTAATAATGAAATGGAATTTGAATCTCATGAAGCTGCATATTCATTTTACAAAGAATATGCTAAGTCTGCAGGGTTTGGTACTGCTAAGTTAAGTAGTCGTCGGTCTAGGGCATCGAAGGAATTTATCGATGCTAAATTTTCGTGTATAAGATATGGTAATAAGCAACAATCGGACGATGCGATTAATCCTCGTCCTTCGCCGAAAATCGGTTGTAAAGCTAGTTTGCATGTGAAGAGACGACCGGATGGTAAATGGTATGTTTTTAGTTTTGTGAAGGAGCATAATCATGAGCTTTTGCCTGCTCAAGCTCATTTTTTTCGAAGTCATCGGAGTTCTGATCCGTTAAGTAATGATGCTCGGATGCGGAGGAAGAAGAACTCAACTGCAGGTGGGAAATTGTTTAGTGCTTATCAGAATGTTGAATGTTTAGAGAATTTTATGAATCGTCAAAATGATAAAGGACGGAGTTTGGTTTTAGAACCAGGGAATGCTCAGTTGCTTCTTGAATTGTTCATGCATATGCAGGAAGAGAATCCGAAATTCTTTTATGCGATTGATTTGAATGAAGAGCATCGACTTAGGAATGTGTTTTGGGTTGATTCTAAAGGGTTGGAAGATTTTGGTTATTTTGCTGATGTTGTTTCTTTTGACACAACGTATTTTACTAGCAAGTATAAAATACCATTGGTGCTTTTCGTTGGTGTTAACCATCATATTCAACCGACATTGCTTGGATGCGCGTTGATAGCCGATGAGACAGTTTTTACTTTTGCCTGGTTACTGCAAACGTGGTTTATAGCAATGGGAGAACATGCTCCACGAGTATTTCTGACAGACCAAAACGAGGCTATTAAAGCTGCTGTTGCTGCTGTTTTTCCAGGAACGCATCACTGTTTTTGTTTGTGGCATGTTTTGGAAAAGATACCAAAACAGCTTGAGTTTTTAGGTACATGGCATGATAGCTTTATGGAAAAGTTCAACAAATGTATATTTAAGTCATGGACAGAAGACCAATTTGAAAGGAGATGGTGGAAGATGGTTGATAGGTTTAAACTTCGAGATGTTAAATGGGTCCAATCCTTGTACGATGATCGTGCGTGTTGGGTGCCAACTTTTATGAGGGATATTTCTTTTGCCGGTTTGTCTACTGGCTCGCGCTCAGAAAGTTTAAATTCTTTGTTTGATAAATATGTCCAAGTTGATACTTCACTTAGGGAATTTATAGAACAGTACCGATTGATTCTTGAAGATAGATATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCCGAGTTAAAGTCTCCTTCCCCGTTTGAAAAACAATTGTTGTTAGTTTACACTCACGAAATCTATCAAAAGTTTCAGTTTGAGGTTTTGGGTGCTTCTGCTTGCCATCTAAAGAAAGAAAATGATGGCGTGATTAGTACTTATAATGTGAAAGACTTTGAAAATAATCAGAACTACATGGTAGAATGGAACACATCAAACTCGGATATATGTTGTTCTTGTCACTTGTTTGAATATAAGGGTTACCTATGTAGACATGCGATTGTCGTTCTCCAAATGTCTGGTGTTTTTAACATCCCGACAAAGTATATATTGAAAAGATGGACAAATGCTGCTCTAAGTAGGCATCCTATTGGTGAAAAGCTGGAAGACGTTCAATCTAAGGTCCGGAGATTCAATGATTTATGCAGACGGGCCATAATATTAGGTGAAGAAGGTTCTTTATCCCAAGAAAGTTACCATATGGCTTTAAGTGCATTAAGTGAAGCTTTAAAGCAATGCGCAAATTTAAATAACTCTGTTGAGAATGCAACCTTAGCTACTCATGTTGGTTGCAATGTTGAAGAAGTGTATCAATCTATTAGTACATCTACTGATAAGGTGTCTGATCCAAAAATGAATTCGGGTAAGAAGGCTGTGAGGACTGGTGTGACTGGTAGGAGTCTAGGAACTGTCGAAAATATTGAAGGAAATAAAGGAAAGGTACCTCAGCTTGGAGTAGTAAGTGGTAACGATGGTTTTCAACAAATGGAGCCTACTGATCTAAGGTCACATAATGTCATGCAAATGCAGTTTCACAGCATGGTGCCGGCTGCTATGTTCCTTAATGTTTCGTCCCCCTTTCACAATGCAACCTCAACTCATTTGCATGACAACCATCTTCCTCCTTAG 2232 0.3853 MDSSNVMANTIPEPNNEMEFESHEAAYSFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASLHVKRRPDGKWYVFSFVKEHNHELLPAQAHFFRSHRSSDPLSNDARMRRKKNSTAGGKLFSAYQNVECLENFMNRQNDKGRSLVLEPGNAQLLLELFMHMQEENPKFFYAIDLNEEHRLRNVFWVDSKGLEDFGYFADVVSFDTTYFTSKYKIPLVLFVGVNHHIQPTLLGCALIADETVFTFAWLLQTWFIAMGEHAPRVFLTDQNEAIKAAVAAVFPGTHHCFCLWHVLEKIPKQLEFLGTWHDSFMEKFNKCIFKSWTEDQFERRWWKMVDRFKLRDVKWVQSLYDDRACWVPTFMRDISFAGLSTGSRSESLNSLFDKYVQVDTSLREFIEQYRLILEDRYEEEAKANFDAWHETPELKSPSPFEKQLLLVYTHEIYQKFQFEVLGASACHLKKENDGVISTYNVKDFENNQNYMVEWNTSNSDICCSCHLFEYKGYLCRHAIVVLQMSGVFNIPTKYILKRWTNAALSRHPIGEKLEDVQSKVRRFNDLCRRAIILGEEGSLSQESYHMALSALSEALKQCANLNNSVENATLATHVGCNVEEVYQSISTSTDKVSDPKMNSGKKAVRTGVTGRSLGTVENIEGNKGKVPQLGVVSGNDGFQQMEPTDLRSHNVMQMQFHSMVPAAMFLNVSSPFHNATSTHLHDNHLPP 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00058 743 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
Vivi18g00058 743 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Vivi18g00058 743 Pfam SWIM zinc finger 512 540 IPR007527 GO:0008270
Vivi18g00058 743 Pfam MULE transposase domain 227 320 IPR018289 -
Vivi18g00058 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 616 IPR031052 GO:0006355
Vivi18g00058 743 Coils Coil 607 627 - -
Vivi18g00058 743 SMART 26again6 517 544 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi18g00058 MULE 3.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi18g00058 - - gmx:100805273 1290.79