Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00049 ATGTCATGTATATCTAATTCACTGTCTCTCTGTCTCTCAAACAAACCCACCTTCCCCTCTCTATCCAACTCAAGACAGAATATGGATTCTACTCAAGAACTCAAACTCAACCTCAACAACCTGAAAGCACTCAAAATCCTAGGTAAAGGAGCAATGGGAACGGTTTTCTTAATTCAACAAAACAACTCCTTCATGGCACTCAAAGTAGTTGATAAAACCTCAACTCACGACGCCGAACGTCGGGCCCGTTGGGAAACCCAAGTCTTATCAAATTTAGCCCATCCATTTCTCCCTTCCCTCCTGGGCTCTTTCGAAACAGACCAATTATTAGCCTGGTCTGTTCCGTACTGCCCAGGAGGAGATCTCAACGTCCTCCGCTATCATCAAACTGATCGCGTGTTCTCCACAACCGTGATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTCGACCACCTTCATACCATGGGTATCGCTTATCGTGACCTTAAACCCGAAAACGTACTCATTCAACAATCTGGCCACGTCACGTTAACAGATTTCGATCTCTCACGTAAACTCTCTCCCAAAACGGTTAAAATCAAAACTCTCATTTCACTCGATAACAGAATCCATGAATCTCGCCGCAAATTACGGAAATGGAGAGTCCCGGAGGCTAACGGGAAGATAGCGAGAGTTACACCGGAGGTTCGACGGGAGCTCAGTTTCTCCGACGGTGAACGGTCTAATTCATTTGTCGGCACGACGGAATACGTCGCGCCGGAGGTTGTTCGCGGCGACGGACATGAGTTCGCGGTTGATTTTTGGGCGCTTGGAGTTTTGACCTACGAGATGATGTATGGGAAGACGCCGTTCAAGGGGAAGAACAAGAAGGAAACGTTTAGGAACGTGCTTTTCAAGTCGCCGGAGTTTGTTGGAAGGAAAACGGCGTTAACGGATCTCATAGAACGGTTGCTTGAGAAGGATCCTGTGAAGAGATTTGGTTACGTTGGTGGTGCTAGTGAGATAAAGGAGCATGAGTTTTTCAGAGGTGTTAAGTGGGAGATGTTGACGGAAGTTGTTCGGCCGCCGTTTATTCCGTCGAGAGATGAAAGTTATTTCACGGCGGATAGATTTGCAGAGGGGGTGAATATAAAGGAATACTTTGAAAAGATGAAGTCTCCGCCGTCGTTGCCGGTTTCGCCGTCGTCTGAGTTTCAGAATAGTGTTTCTTTTGAAGAGTTCTGA 1227 0.4686 MSCISNSLSLCLSNKPTFPSLSNSRQNMDSTQELKLNLNNLKALKILGKGAMGTVFLIQQNNSFMALKVVDKTSTHDAERRARWETQVLSNLAHPFLPSLLGSFETDQLLAWSVPYCPGGDLNVLRYHQTDRVFSTTVIRFYIAEILCALDHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSPKTVKIKTLISLDNRIHESRRKLRKWRVPEANGKIARVTPEVRRELSFSDGERSNSFVGTTEYVAPEVVRGDGHEFAVDFWALGVLTYEMMYGKTPFKGKNKKETFRNVLFKSPEFVGRKTALTDLIERLLEKDPVKRFGYVGGASEIKEHEFFRGVKWEMLTEVVRPPFIPSRDESYFTADRFAEGVNIKEYFEKMKSPPSLPVSPSSEFQNSVSFEEF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00049 408 MobiDBLite consensus disorder prediction 390 408 - -
Vivi18g00049 408 FunFam Serine/threonine-protein kinase OXI1 240 361 - -
Vivi18g00049 408 ProSitePatterns Protein kinases ATP-binding region signature. 47 68 IPR017441 GO:0005524
Vivi18g00049 408 Gene3D Phosphorylase Kinase; domain 1 41 120 - -
Vivi18g00049 408 SUPERFAMILY Protein kinase-like (PK-like) 21 369 IPR011009 -
Vivi18g00049 408 Gene3D Transferase(Phosphotransferase) domain 1 240 361 - -
Vivi18g00049 408 ProSiteProfiles AGC-kinase C-terminal domain profile. 343 408 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi18g00049 408 ProSiteProfiles Protein kinase domain profile. 41 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi18g00049 408 Gene3D Transferase(Phosphotransferase) domain 1 121 191 - -
Vivi18g00049 408 MobiDBLite consensus disorder prediction 386 408 - -
Vivi18g00049 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Vivi18g00049 408 Pfam Protein kinase domain 43 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi18g00049 408 PANTHER FLIPPASE KINASE 1-RELATED 25 363 - -
Vivi18g00049 408 FunFam Serine/threonine-protein kinase OXI1 121 189 - -
Vivi18g00049 408 SMART serkin_6 41 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00049 36 393 AGC Kinase Gene Family AT1G51170 61.008 5.49e-157 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi18g00049 Pkinase 1.1e-53 CL0016