Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00033 ATGAATGGTTCAGGTTTAGGTGGTGGTTTTTTGAGTGGTGGGGGTATTTTGGACATTAAATCTCCATTTCATAGGCATGGTAAACAACACCATATGAATATCATGAATGGTTTGGAAAATCAAAATGATAACAAAAATGGTTTAATTGATGTGAAAAATTTGAATGTTGGGTTGAATTTCGGTAAAGGGAAAGCAATTGTTAGCTCGAATGATAATGATATGAGCGAAGACGATGAGGCGGAAGATGGGAATTGCGAGAATTTTTTTGATGGTGGGAAAGGGAAAAAGGGGTCTCCGTGGCAGAGAATGAAGTGGACGGATGATGTGGTTGGGCTGCTTATAGCGGTGGTGAGTTGCGTTGGTGACGATGGGACGATTGGTGGTGGAGATGGTGTTAAGAGGAAGTCTGTTGTTTTACAGAAGAAGGGTAAGTGGAAAACGGTTTCGAAGATAATGATAAGCAAGGGCTGTCATGTGTCGCCGCAGCAGTGTGAGGATAAGTTTAATGATTTGAATAAGAGGTATAAGAGGTTGAATGAGATACTTGGTAGGGGGACTTGTTGTCAGGTGGTTGAGAATCCTGCGTTGATGGATTCGATGACGAATTTGTCTGCTAAGGCGAAAGATGATGTTAGGAAGATATTGAGTTCGAAGCATTTGTTTTATAAGGAAATGTGTGCTTACCATAATGGACAAAGGGTACCGAGTAGCCATGATCTTGACTTGCATGGTTATGCGTTGGAACATGGGAAGGACTCGAGAGATAACGATGGCTCTGAGGATGATGATGACGATAACAATGAAAGTGAAGACGATGAGATGGATGGTGAGATTAATATTAATGCACATGGGGATGGAGGGAGGAGGACGGAGGAGTTTTTTCGTGATCGAGATAAATTAAGTGAGGAGGATGGCCATGGACACTCTTGGCCGCCATCTATTAGGATGAAGAAACTTGAGGTTGAAATGGCAAAGGTTTTTCAAGACCCTACAAAGTCACCGTGGGAGCGAAGAGAATGGATTAAGGCACAACTGTTGCAGCTTCAAGAGCAAAATGCCGAGTACCAAGCCAAGGCTCTTGAACTTCAGAAACAACGGTTTAAGTGGTTAAGATACTGTAGCAAGAAGGATAGGGAGATGGAGAAGATGAAGATGGAGAACAAGCGAATGAAATTGGAAAATGACCGCAGAATCTTGAAACTGAAGCAGAGAGAGCAGGAGGCAGATTTCAGTAGGTCTGAGATGTCCTTAGACGCTGCAACCATCGGTATCAACAAGCCGCAAGGGAGAGAACATATCAACTTGGCTAGACAGCAGTAG 1320 0.4311 MNGSGLGGGFLSGGGILDIKSPFHRHGKQHHMNIMNGLENQNDNKNGLIDVKNLNVGLNFGKGKAIVSSNDNDMSEDDEAEDGNCENFFDGGKGKKGSPWQRMKWTDDVVGLLIAVVSCVGDDGTIGGGDGVKRKSVVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMTNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRVPSSHDLDLHGYALEHGKDSRDNDGSEDDDDDNNESEDDEMDGEININAHGDGGRRTEEFFRDRDKLSEEDGHGHSWPPSIRMKKLEVEMAKVFQDPTKSPWERREWIKAQLLQLQEQNAEYQAKALELQKQRFKWLRYCSKKDREMEKMKMENKRMKLENDRRILKLKQREQEADFSRSEMSLDAATIGINKPQGREHINLARQQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00033 439 MobiDBLite consensus disorder prediction 71 97 - -
Vivi18g00033 439 MobiDBLite consensus disorder prediction 257 275 - -
Vivi18g00033 439 Coils Coil 373 409 - -
Vivi18g00033 439 MobiDBLite consensus disorder prediction 248 289 - -
Vivi18g00033 439 PANTHER F16F4.11 PROTEIN-RELATED 14 412 - -
Vivi18g00033 439 Pfam Myb/SANT-like DNA-binding domain 102 227 IPR044822 -
Vivi18g00033 439 Coils Coil 338 365 - -
Vivi18g00033 439 Gene3D - 105 177 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi18g00033 Myb_DNA-bind_4 1.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi18g00033 - - psat:127087226 722.235