Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00024 ATGCCTTCAATTTCGGATCTGTTTTCTATAGTAACAGACCGCTCTCGTTATTCACATCACAGAGAAAGATGGCTTGCCGGCAGTTATGGGCTTCAAGAGCTGCATCATACCTCAGGATCTCTGTCTTTCACAGAAGCTTCTCTTATGGTTAAAAAGATCCCTTCGACCGATGCTACCGGTACACCGAACTCGCAGAATGGTGATTCCAAGGACAAAGGAAGGAAGTTTGTTGAAACTATTGAGCTTCAAATTGGCCTCAAGAACTACGATCCACAAAAGGATAAACATTTCAGCGGCTCCGTCAAGTTGCCTCACATCCCTCGCCCTAAGATGAAGATTTGTATGCTTGGAGATGCCCAACACGTTGAAGAGGCAGAGAAAATTGGTTTGGAGTCAATGGATGTTGAAGCTTTGAAGAAGCTCAACAAGAATAAGAAGTTGGTGAAGAAACTTGCCAAGAAGCACCATGCCTTCTTAGCTTCTGAGTCTGTCATTAAACAGATTCCCCGTCTCTTGGGTCCTGGTCTCAACAAAGCAGGCATGTTTTTATCCCCTGGCTTAGGATTTTGGATATTTTGA 579 0.4404 MPSISDLFSIVTDRSRYSHHRERWLAGSYGLQELHHTSGSLSFTEASLMVKKIPSTDATGTPNSQNGDSKDKGRKFVETIELQIGLKNYDPQKDKHFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKHHAFLASESVIKQIPRLLGPGLNKAGMFLSPGLGFWIF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00024 192 CDD Ribosomal_L1 70 185 IPR028364 -
Vivi18g00024 192 FunFam Ribosomal protein 114 186 - -
Vivi18g00024 192 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 66 178 - -
Vivi18g00024 192 Pfam Ribosomal protein L1p/L10e family 73 180 IPR028364 -
Vivi18g00024 192 Gene3D - 109 187 IPR016095 -
Vivi18g00024 192 SUPERFAMILY Ribosomal protein L1 72 184 IPR023674 -
Vivi18g00024 192 MobiDBLite consensus disorder prediction 54 73 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00024 67 182 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 90.517 2.31e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi18g00024 K02865 - osa:9266191 187.193