Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi18g00008 ATGCATCCCTTAACTCTCCCTAAAATGTTGCTTTCTCTTTCTCCAATTTACCGATTTCTTCAACCATCTTCATGCCTCCATTACCAAACCCAAACCACTTGTTCAATTTCCATACCTAGATGCAGAATCAACCCTAGAATCTTCACAAATAGAAATCAGCATGGGAGTAAGGGAAGAGGTAGCAATAGAATAACTGTAATTGTAAAAGCAAGGCGCAGCGAGTCTCCATATGAGGTTCTGGGATTGTCTCCTTCCGCGTCTGTGGCTGAAATCAAGAAAGCGTATCGGAAACTCGCTCTCAAGTATCATCCTGATGTTAACAAAGAGAAGAATGCACAGGAGAAATTTTTGAGGATAAAACATGCATACAATACATTGCTAAATTCTCCACGCAGAAAGTATGATTCGGGAAATCGTGGTTCTAATTCTTCTCAAAGAAGTCAAAGTCGGAATCCACAAGCTGAAGAAGAGTTTTATGGATTAGGAGACTTCTTTAAGGATCTTCAAGAAGAATTCAAGAACTGGGAAGCCAGTGCGGCTTCACAAGGAAAACCAAAGAGTCTATGGGAGGAATTGTCGGAAATAGGAGAAGAGTTTGTGGAGTTCCTTGAGAAAGAACTCAATATAGTTGATCCAAATGACAATCCTCAAGAAGGAAATCCATCTAATTTATATGGCACAGAGACACCAAACAACAGGACTCAAGGGGAAGCTCGCAAGGAAAACAAAAGCGTTGAGGATAACCTTGATGAAGTAGAAGCTGCTCTTGCTCAGTTAAAAAAGGAGTTAGGTTTATAG 798 0.4035 MHPLTLPKMLLSLSPIYRFLQPSSCLHYQTQTTCSISIPRCRINPRIFTNRNQHGSKGRGSNRITVIVKARRSESPYEVLGLSPSASVAEIKKAYRKLALKYHPDVNKEKNAQEKFLRIKHAYNTLLNSPRRKYDSGNRGSNSSQRSQSRNPQAEEEFYGLGDFFKDLQEEFKNWEASAASQGKPKSLWEELSEIGEEFVEFLEKELNIVDPNDNPQEGNPSNLYGTETPNNRTQGEARKENKSVEDNLDEVEAALAQLKKELGL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi18g00008 265 PRINTS DnaJ domain signature 95 110 IPR001623 -
Vivi18g00008 265 PRINTS DnaJ domain signature 77 95 IPR001623 -
Vivi18g00008 265 PRINTS DnaJ domain signature 111 131 IPR001623 -
Vivi18g00008 265 SMART dnaj_3 74 131 IPR001623 -
Vivi18g00008 265 ProSiteProfiles dnaJ domain profile. 75 138 IPR001623 -
Vivi18g00008 265 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 37 204 - -
Vivi18g00008 265 MobiDBLite consensus disorder prediction 210 249 - -
Vivi18g00008 265 Coils Coil 235 265 - -
Vivi18g00008 265 SUPERFAMILY Chaperone J-domain 22 133 IPR036869 -
Vivi18g00008 265 MobiDBLite consensus disorder prediction 234 249 - -
Vivi18g00008 265 Gene3D DnaJ domain 72 181 IPR036869 -
Vivi18g00008 265 MobiDBLite consensus disorder prediction 128 154 - -
Vivi18g00008 265 MobiDBLite consensus disorder prediction 129 154 - -
Vivi18g00008 265 Pfam DnaJ domain 76 135 IPR001623 -
Vivi18g00008 265 CDD DnaJ 76 128 IPR001623 -
Vivi18g00008 265 MobiDBLite consensus disorder prediction 213 233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi18g00008 77 136 C2H2 Transcription Factor Family AT1G74250 41.791 6.37e-06 45.4