Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi188g00023 ATGGAGTGCAACAAGGATGAGGCTCTGAGGGCAAAAGAAATTGCTGAGAATAGATTGCAGACTAGTGACTTTGCAGGGGCACTGAAGTTTGCTATGAAAGCTCGGCGACTGTTTCCTGATACCCAGAACATCACTCAGATCATTACTATTTGTGAGGTTCAATGTGCTGCACAGAACAAAATCTCTACGTCTGATATGGACTGGTATGGAATTCTTCTAACTGATAAATTTTCTGAAGAAGCAGCGATAAAGAAACAGTATAGAAAACTCGCACTGCAACTTCATCCTGATAAAAATAAATTCGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCTAACAGAGTATTGAGTGACCCAGCAAAGCGTTCTTTATATCACATGAAGATTAGCCGCCTTGCTGGAATTAAAGCACCTCAGGCTCCATCCCATCACCATAATAGTTTTCATGCACAGTTCCATTCTCAAAATTCAAATTCGAATAAGCAGGAGACATTTTGGACATCATGCCAACATTGTAATACTAAGTACGAGTACTACAAAAACATTATAAATGCTACCTTGCATTGTCGACAATGTCTTAAACTCTTCAAAGCTCGCGATATAGGGTCGCCGGTTGCACCGTCAGGACATACATCATCATTTTACAGAAATAAAGATATTCCAAACCACGTGCCACCAAAAGAAGCATCACAAAGTAATGGTGGAAAACCTTATGGTAAAGGACCGGAGGACATGTTTGTGCCCCTTCGTCCTGAATCTACGACAAAACATGGGGCTGGAGAAGGGGCCTCTTCTAAGGTTCGAAAGAGTAAAGATGGCCATGGTACTGCTGGTGTGACAAAGGCTGCTGCTGGAACTTCCAACCGTGCTACATCTAAGGCCAAGCCCCCACGGACCCAAACAAATGTTGGAAGTAAGAGAGCAAGGGAGTCAGCATCAGCAGATTCAGTTGATGGAAATGGCATGAAATATAGCAATGTTCAAGAAAATGGTGTTGATCCTTCTGGACTTGACACAGGAGTCCATTCTAAGAAATCTTCCAGGAAAAAGCAGCACGCTTCATACACAGAAACTGCTAGAGATGGTGAGTTTGAGAATGCTTCCAAAAGGCCACGACAAGATGAATCTTCTAAGACCACTAAAGTGGAGAGAAGAGATGGGCCTTCAAATGGTGGGTTGTTCAATAAGACAAGTTCAACTAGTTTCACTGCTGATGTGGCTGGTCAGAATGGAGAGACGAGAAACAAAACAAATGGCCAACCTGAAAAAACAGTTTTAAGGAATAAAATGAAAGTTGAGCAATCGAACTCGAAAAGAAAGGAGACATCCAATCCCGATATTATATTATGTCCTGATCCAGAATTCAGTGATTTTGATAAGGTTAGAGCAAAGGATTGTTTTGCTGCTGATCAATACTGGGCTATTTATGATGATACTGATTCTATGCCAAGATTCTATGCTCGCATCAAGAAGGTTCACTCCCCTTTCAAACTGGAATATACTTGGCTGGAACCAAATCCAGATCTCAAAGATGAGATTGAATGGCATGAAGCAGATTTGCCTATTGCGTGCGGTAAGTACAGACGTGGAAGTACTCAGACAACTGGAGATATTGATATATTCTCTCACATGGTGCATTGCATAAAAGGGAGGGCTAGAGGTTCTTATTTGGTATATCCCATGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATATAGGATGGGGTTCTAAGCCTGAAAAGAATGCAGAATATCAATTTGAATTTGTGGAAGTCCTTGCTGATTTTGATGAGAAAGATGGTGTTAAAGTTACTTATCTGAGCAAAGTGAAAGGGTTTCTTTGTCTCTTTCAGCAAACTGTGCAGAATGGAGTTGGATTATTTTATGTTCCACCTAATGAGTTGTATAGGTTTTCACACCGAGTTCCTTCATTTATGATGTCTGGTGATGAAAGGAAAGATGTTCCAAAAGGATCATTTGAACTTGACCCTGCTGGCCTGCCTAAGAGTGTTTTTCAGGTTCAAGTTGGCGATCCGGGTGATGTGATGGAGGATGGAATGTTAAACAATGGAGTCAGTTCTTGCAAGGAATCCTCCAAGCGTAAAGTTGATCAGGCAAAGTGTAACGAGAGTATTCCCAAAGCAAAATTGCGAGAAAGTGGCGGTCTTGAAAGAGTTCCACCTATCAATAGAAAGTGGTGGTCAAACGCAGAAAATATGGGCAATGGTCATACAAGTACTAGTCAACATATGGTCAGAGAACACGATAAGAACACTAGTCACAGGGACTACAGTCAACCGGAGGGAAGTGAAGCTGCTGCAAGCCAGAAAAACAAGAATTTCAAGACACCACAGAAACCCAACAAGAGAAATTATCACACGGAGACATCGACAGTTCGAAGGTCACCTAGAGATTTAAGCAAGAAAAATGATGCAAGAGGCGCTGGTGAATGTGCCACTAGCAAGTTGGCTGATAATCATTCCAACACTAACAATAATATTAAGGAAACTGTGTTTTCTCAGTCGGTGGGAAGCGATCACGCGTGCTTGAATAAAGAATCCGGAGTTGTGGGAGCAAGTTATGACTTTAATAAGGAAAAATCTAGGGAGATGTTTCGGTTTGGTCAGATATGGGCAATATACGGTGATAGAGATAATATGCCTGTTGTTTATGTTCAAATCAAGAAGATTGAATCCACCTCTAATTTTAGGTTGCATGTATCCGAACTTGAACCCTGCTCGCCCCCAGAAGGTTTCCAGCGAGCAATATCCTGTGGTTCCTTCAAAATAAAAAAAACCAAACCCCAAATTCTCTCTCCCTCGGCATTCTCTCATCAACTAAAAGTTGAACCCTTGGAAAACAGTATATATGAAATTTACCCTAAAAAAGGTGAGATTTGGGCTCTATACAAGGACCATAACTATGAACTTACTTCTTCAGACCAGGACAGAGGCAGAAGTGAATTTCATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATAGAAGTTGTTATTCTGTTGCGTTTTAGCGGTTCTCAGCCAATTTTCAAGGCTCCCATTACGCGGCGATCTAAGACTGGTATAATTGAAATATTAAGAGAAGATGTTGGTAGATTTTCACATCAGGTTCCTGCTTTTCAGCATACTGGAGAAGACGATCTTCATCTCAGAGGGTGTTGGGTGGCCGATCCGTCTTCAATTCCTGGTTTTGCAGTATAG 3231 0.415 MECNKDEALRAKEIAENRLQTSDFAGALKFAMKARRLFPDTQNITQIITICEVQCAAQNKISTSDMDWYGILLTDKFSEEAAIKKQYRKLALQLHPDKNKFAGAEAAFKLIVEANRVLSDPAKRSLYHMKISRLAGIKAPQAPSHHHNSFHAQFHSQNSNSNKQETFWTSCQHCNTKYEYYKNIINATLHCRQCLKLFKARDIGSPVAPSGHTSSFYRNKDIPNHVPPKEASQSNGGKPYGKGPEDMFVPLRPESTTKHGAGEGASSKVRKSKDGHGTAGVTKAAAGTSNRATSKAKPPRTQTNVGSKRARESASADSVDGNGMKYSNVQENGVDPSGLDTGVHSKKSSRKKQHASYTETARDGEFENASKRPRQDESSKTTKVERRDGPSNGGLFNKTSSTSFTADVAGQNGETRNKTNGQPEKTVLRNKMKVEQSNSKRKETSNPDIILCPDPEFSDFDKVRAKDCFAADQYWAIYDDTDSMPRFYARIKKVHSPFKLEYTWLEPNPDLKDEIEWHEADLPIACGKYRRGSTQTTGDIDIFSHMVHCIKGRARGSYLVYPMKGETWAIFRHWDIGWGSKPEKNAEYQFEFVEVLADFDEKDGVKVTYLSKVKGFLCLFQQTVQNGVGLFYVPPNELYRFSHRVPSFMMSGDERKDVPKGSFELDPAGLPKSVFQVQVGDPGDVMEDGMLNNGVSSCKESSKRKVDQAKCNESIPKAKLRESGGLERVPPINRKWWSNAENMGNGHTSTSQHMVREHDKNTSHRDYSQPEGSEAAASQKNKNFKTPQKPNKRNYHTETSTVRRSPRDLSKKNDARGAGECATSKLADNHSNTNNNIKETVFSQSVGSDHACLNKESGVVGASYDFNKEKSREMFRFGQIWAIYGDRDNMPVVYVQIKKIESTSNFRLHVSELEPCSPPEGFQRAISCGSFKIKKTKPQILSPSAFSHQLKVEPLENSIYEIYPKKGEIWALYKDHNYELTSSDQDRGRSEFHIVEVLADSDKSIEVVILLRFSGSQPIFKAPITRRSKTGIIEILREDVGRFSHQVPAFQHTGEDDLHLRGCWVADPSSIPGFAV 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi188g00023 1076 Pfam Domain of unknown function (DUF3444) 449 654 IPR024593 -
Vivi188g00023 1076 Pfam Domain of unknown function (DUF3444) 864 1055 IPR024593 -
Vivi188g00023 1076 SMART dnaj_3 66 123 IPR001623 -
Vivi188g00023 1076 SUPERFAMILY Chaperone J-domain 61 129 IPR036869 -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 428 442 - -
Vivi188g00023 1076 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 752 767 - -
Vivi188g00023 1076 CDD DnaJ 67 120 IPR001623 -
Vivi188g00023 1076 Gene3D DnaJ domain 64 177 IPR036869 -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 737 833 - -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 768 795 - -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 283 311 - -
Vivi188g00023 1076 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vivi188g00023 1076 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vivi188g00023 1076 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 352 387 - -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 207 450 - -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 320 335 - -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 796 815 - -
Vivi188g00023 1076 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1072 - -
Vivi188g00023 1076 MobiDBLite consensus disorder prediction 393 426 - -
Vivi188g00023 1076 Pfam DnaJ domain 67 127 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi188g00023 4 203 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.524 6.82e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi188g00023 - - mtr:11432260 1568.13