Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi188g00004 ATGCCAAAGATGGATCTGTCTAGGATATCTTTGAGGCCATTCAAGCTAACAGACGTTGACGATTTCTTCTTATGGGCAGGTGACAACCAAGTAACCAAAAACATCCGATGGAAGACATGCTTGTCAAGGGAAGAAGCTCTAGCATTCATCAAAGATGTCTGCATACCTCACCCATGGCGCCGATCTATCTGTCTCGACGATCATTCCATCGGTTTCGTTTCTGTATATCGTTGGTCGGGTGATGATAGGTGCAAGGCTGACATAGGTTATGCTGTTGCTGCTAACTACTGGGGACATGGGATAGCCACAAGAGCAATCAAGATTGCTTTGTCACATGTGTTTAATGATTTTCCTGATTTGTTAAGGTTGCAGGCTTTTGTTGATGTGGATAATAAGGCTTCTCAGAGAGTTTTGGAAAAGGCTGGGTTTGTTAGAGAGGGTGTTCTTAGAAAATATACTTTTATCAAAGGTAGTGTTAAGGATTTAGTAGTGTTTAGTTTCTTGTCAACAGATGAATTTCCTCGCGTTGACTAG 534 0.4195 MPKMDLSRISLRPFKLTDVDDFFLWAGDNQVTKNIRWKTCLSREEALAFIKDVCIPHPWRRSICLDDHSIGFVSVYRWSGDDRCKADIGYAVAANYWGHGIATRAIKIALSHVFNDFPDLLRLQAFVDVDNKASQRVLEKAGFVREGVLRKYTFIKGSVKDLVVFSFLSTDEFPRVD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi188g00004 177 Pfam Acetyltransferase (GNAT) domain 8 143 IPR000182 GO:0016747
Vivi188g00004 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 169 IPR000182 GO:0016747
Vivi188g00004 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 168 IPR016181 -
Vivi188g00004 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 171 - -
Vivi188g00004 177 Gene3D - 2 173 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi188g00004 Acetyltransf_3 9.6e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi188g00004 - - gmx:100527210 295.434