Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi188g00001 ATGGCTTCATCACCATTATTATTCACAGTGAGGAGGTTTCAACCAGAGTTGGTGCTTCCGGCTGCACCCACTCCTCGTGAAGTTAAACTACTATCTGACATAGATGATCAACAAGGCTTACGTTTTAATATTCCTCTCATATTTATCTATCGCTACGAACCATCAATGGCAGGAAGAGATCCGGTTGAAGTTCTTAGAAATGCACTCTCAAAAACACTTGTTTATTACTATCCACTTGCGGGAAGGATTAAAGAGGGGGTTGGACGCAAGTTGATGGTTGATTGTACTGGTGAAGGTGTCATGTTCGTTGGAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTCTCCAACCACCATTCCCTTGCTTCCAAGAGCTTCTATATGATGTTACCGGCTCTGAACTAATTATTGACCGTCCTATTCGACTCATACAGGTGACACGTCTCAGTTGCGGTGGTTTCATAGTGGTAATTAGTTGGAATCATACAAGTGGTGATGCAGCTGGTTTGAAACAGTTCATGAATGCTTGGGCAGAAATAGCTCGAGGAACACATCAACCTTCGATTCAACCTGTGTGGCATAGAGAGCTTCTAATGGCAAGAGATCCACCACACATTACATGTAGCCATCGTGAATACAAACAAATACTTCAATCAAACAATACCATCAAAGAAGAAGAAACTACTACTACCATAGTCCATCAGTCTTTTTTCTTTAAACCTTCAGACATAGCTAGAATTCGTCTCTTGGTTCCATTTCACCTTAGCCAATGTACCACATTCGATCTTATCACTGCATGTTTTTGGTACTGTCGCACAAAAGCATTGCAGTTAAAGCCTGAAGAAGAAGTAAGAATGATGGTGATCGCCAATGCGCGTTCAAGGTTTAGTGCTAAACATTCTTCATTTGTCGGGTATTACGGTAATTGTTTTGCATTTCCTGCGGCCCTCACCACAGCAGGGAAGCTTTGTGGAAACTCACTAGGTTATGCATTAGAGTTGATAAGAAAAGTAAAAGATGAAGTTACAGAGGAATACATACAATCTGTAGCAGATTTTATGGTTATTAACGAAAGGTGTTTATTTACAACTGTAAATTCTTGTATTATTTCAGATTTGACTCGAGCTAAATTTAGAGAAGTGAATTTTGGATGGGGTGAAGGGGTGTATGGTGGAGTTGCTAAAGGTGGGGCTGGACCTTTTCCAGGTATAACTTATATTGTTCCACATAAGAATGCAAAAGGAGAAGAATGTATGATGTTACCAATTTGTTTGCCCTCTAAAGTAATGAAGAGGTTTGCTAAGGAGTTAGATGAGATTCTTCATAGCCAAAATTATCCTACCACAAGTGTTTCCAGTTTTGTCAAGTCTACCTTATAG 1386 0.4004 MASSPLLFTVRRFQPELVLPAAPTPREVKLLSDIDDQQGLRFNIPLIFIYRYEPSMAGRDPVEVLRNALSKTLVYYYPLAGRIKEGVGRKLMVDCTGEGVMFVGAEADVTLDQFGDSLQPPFPCFQELLYDVTGSELIIDRPIRLIQVTRLSCGGFIVVISWNHTSGDAAGLKQFMNAWAEIARGTHQPSIQPVWHRELLMARDPPHITCSHREYKQILQSNNTIKEEETTTTIVHQSFFFKPSDIARIRLLVPFHLSQCTTFDLITACFWYCRTKALQLKPEEEVRMMVIANARSRFSAKHSSFVGYYGNCFAFPAALTTAGKLCGNSLGYALELIRKVKDEVTEEYIQSVADFMVINERCLFTTVNSCIISDLTRAKFREVNFGWGEGVYGGVAKGGAGPFPGITYIVPHKNAKGEECMMLPICLPSKVMKRFAKELDEILHSQNYPTTSVSSFVKSTL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi188g00001 461 Pfam Transferase family 13 440 - -
Vivi188g00001 461 Gene3D - 215 439 IPR023213 -
Vivi188g00001 461 Gene3D - 8 214 IPR023213 -
Vivi188g00001 461 PANTHER ACYL TRANSFERASE 4 8 444 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi188g00001 17 442 Monolignol Biosynthesis Gene Families AT5G48930 28.700 4.54e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi188g00001 K19861 - gmx:100792864 572.007