Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1888g00127 ATGGACAATGCAATGGAAGAAACACACGGCGAGTATTGTGTTTCCGATTTACCTGAGTATGATGTTAACAGGCAAGGGAATCAGAGGACTGGTATAACGGGACTGAAGAAGAGAGGTCATGTGAGTCGTTCTTGGATAAAAATCGATCAGGATGGGAATTCGGAGGTTGTGACGCTTGACAAGGCTACTATTATGAGAGATTGCTGTTTGCCTTCGAGAGATCTTCGGTTATTGGATCCCATGTTTATTTATCCTTCTTCGATATTAGGAAGGGAGATGGCTATTGTTGTCAACCTTGAGCAAATCCGGTGTATAATTACTGCGGATGAAGTGATTCTCATGAATTCACTGGATGGGACTGTTGGTCGGTACAGGTCACAGTTATGCAATCGGCTCCGGAAAGAAAAGTCTGATGACCTTCCCTTTGAATTTCGGGCACTGGAGTTGGCTCTCGAATTGACATGCACATCTTTAGATGAACAGGTGAAAGAATTAGAGATGGAAATATATCCCGTCCTAGATGAACTGGCCTCGTCTATCAGTACTCTCCTTCTGGAAAGTGTTAGAAGATTCAAAGGTCACCTTCTTGCTTTGACTCAGCGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGACGATGGTGACATGGCTGAGATGTGCCTGACTGAGAAAAGGAGAAGATCAGATGCCTACCCTTCGAGTGATTTGAATCTAAGTCGCACATCATCAGGCAAAGTGATTTCGAAATCAGATCCTACTTCACCGGAGCAGTCAGTTAGTGGCTTACAGATGTTGCGTAGAACTATCAGCAGCAGTATTGGAAATTCAAGTAAATATGGTAGTACAACAAGTTCATCAGATAATGAAGAAAGGATTCAGCCACTGGAGATGTTGCTGGAAGCATACTTTATCGTCATTGATAATACTCTCAATACATTATCCTCGCTCAAAGAATACATAGACGACACTGAAGATTTTCTCAACATAAAACTGGGGAATATTCAAAACCTCCTAATAAAGTTTGAGATGCTTCTTACAGCAGCCACAATGGTGGCTGCAATATTTACCGCGGTGGCAGGAGTATTTGGAATGAACTTTAAAACCTCAGTTTTTGACTACACATCTGGATTCAACTGGGTTATAGTAATTACTGGATTTGGTTGTGTAGCATTGTATTTCTCCTTACTATCCTATTTTAGATACAAAAAAGTGCTTCCAGAATAA 1233 0.4128 MDNAMEETHGEYCVSDLPEYDVNRQGNQRTGITGLKKRGHVSRSWIKIDQDGNSEVVTLDKATIMRDCCLPSRDLRLLDPMFIYPSSILGREMAIVVNLEQIRCIITADEVILMNSLDGTVGRYRSQLCNRLRKEKSDDLPFEFRALELALELTCTSLDEQVKELEMEIYPVLDELASSISTLLLESVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRSDAYPSSDLNLSRTSSGKVISKSDPTSPEQSVSGLQMLRRTISSSIGNSSKYGSTTSSSDNEERIQPLEMLLEAYFIVIDNTLNTLSSLKEYIDDTEDFLNIKLGNIQNLLIKFEMLLTAATMVAAIFTAVAGVFGMNFKTSVFDYTSGFNWVIVITGFGCVALYFSLLSYFRYKKVLPE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1888g00127 410 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 26 408 IPR039204 -
Vivi1888g00127 410 CDD Mrs2_Mfm1p-like 45 407 IPR039204 -
Vivi1888g00127 410 Gene3D Magnesium transport protein CorA, transmembrane region 120 341 - -
Vivi1888g00127 410 MobiDBLite consensus disorder prediction 235 264 - -
Vivi1888g00127 410 FunFam Magnesium transporter MRS2-1 33 116 - -
Vivi1888g00127 410 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 346 398 IPR045863 -
Vivi1888g00127 410 MobiDBLite consensus disorder prediction 227 264 - -
Vivi1888g00127 410 Coils Coil 195 215 - -
Vivi1888g00127 410 Gene3D - 31 116 - -
Vivi1888g00127 410 Gene3D Magnesium transport protein CorA, transmembrane region 348 408 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1888g00127 5 409 MRS2 Gene Family AT2G03620 60.849 1.69e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1888g00127 K16075 - gmx:100803935 593.578