Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1888g00059 ATGTGTTCGGTAACAAACTCAGTTCTCATATCACTTCAAAAACCTCAAATTTCTTCACTTTTTTTGTCACCCAAAAGAGTTTCAACTTCAACCAGTTATGCCTTGTTAAAGTCTCCAACACTTCACTTTGAGACTAAAGATTCAAGCTTGGTGTTTTCTCCATTGGTGAAGGCCTTGGGAGTAAGACAAAGAAGATTTCCAGTTGTTGTTGCAGCATTAGCAGCTGATGCTGATGACAGTGAAATTGAAATTTCAAATGGGTCAGTTATATCCTCAAAGAGTTTTGGTGAGAAATTTCCTGCATTGGTTACTGGTTTCTTTTTCTTTATGTGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTCTACAATTATTTCCCATATCCATATTTTGTTTCTGTTGTACATCTCCTTGTTGGGGTGGTATATTGTCTTGTTTCTTGGGGTTTAGGTCTACCAAGACGCGCACCAATGAATAAGGAGCTTTTGTTACTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTTATGTCTAATGTATCATTCGCTGCGGTTGCTGTGTCTTTTACACATACCATAAAAGCTCTGGAGCCATTTTTCAACGCTTCCGCTTCCCAGTTTGTTTTAGGCCAAAATATTCCCTTGTCTCTGTGGCTATCCTTGGCCCCTGTTGTTTTTGGTGTATCAATGGCATCACTAACTGAACTGTCTTTCAATTGGACTGGTTTCATTAGCGCAATGATTTCAAATATAGCGTTTACATACAGAAGTCTATATTCTAAGAAAGCAATGACAGGAATGGACAGTACGAATGTATACGCGTATATTTCAGTAATCGCGCTCGCCTTTTGTATCCCTCCGGCAATACTTATTGAGGGGCCCCAACTCATGGAATTTGGATTTAGAAATGCTATAGCCAAAGTAGGATTGATCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTACCATCTTTACAATCAGCTTGCTACTAATACTTTGGAACGTGTTGCGCCACTGACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTTGTCATTGGATTTTCAATAGTGGTGTTTGGCAACAAGATATCTACACAAACTGGCATTGGAACTGCGATTGCGATTGCAGGTGTTGCCATCTATTCTCTGATAAAAGCAAACCTGGAAGAACAAAAACGGAAAGCTGCTGCAGCCGCGGCTGCATCTTAA 1233 0.3933 MCSVTNSVLISLQKPQISSLFLSPKRVSTSTSYALLKSPTLHFETKDSSLVFSPLVKALGVRQRRFPVVVAALAADADDSEIEISNGSVISSKSFGEKFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLVSWGLGLPRRAPMNKELLLLLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNASASQFVLGQNIPLSLWLSLAPVVFGVSMASLTELSFNWTGFISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISVIALAFCIPPAILIEGPQLMEFGFRNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRKAAAAAAAS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1888g00059 410 Pfam Triose-phosphate Transporter family 103 390 IPR004853 -
Vivi1888g00059 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Vivi1888g00059 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 391 - -
Vivi1888g00059 410 PANTHER SOLUTE CARRIER FAMILY 35 105 397 - -
Vivi1888g00059 410 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 400 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1888g00059 60 401 Antiporters AT5G46110 76.023 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1888g00059 K15283 - pvy:116132902 588.186