Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1887g00033 ATGCGACGATTGAATGCTCGCAATCGCGTCGGCTCAAATCCAAACCAAATGGATCCAACCGTGAAACGGATCCAAATCCGCTCCACAAATCTCTTCGCTCGCAACAACAACAGCAACAGCAATTCAAAGTGTCTCTGTTTCAAGACCACGTTCATCGTTCCTCTCTTCTTCTCGTTCCTCCTCATCCTTTCGTATTACACCTTCTTCTCCTCCTCATCGGGAGCCAGAACTAGAGCCAGTTTCCGGTACAGTATAATCGTCGACGGTGGAAGTACAGGAACTAGGGTTCATGTGTTTAAGTATAGGGTTAAAAACGCGTTGGATTTTGGGAAAAAGGGGGTGGTTACGATGAGAGTGAATCCAGGTTTGTCGTCGTTCGCGGAGGATCCGGATGGAGCGGGGAGTTCGTTGTCGGAGCTGGTGGAGTTTGCGAAAAGCCGGATCCCTAAAGAGAGATGGAGGGAGACGGAGATTCGGCTTATGGCTACGGCTGGGATGAGGATGCTGGATGTTGAAGTGCAAGAGAATATTATGGATTCTTGTAGGAGGGTTTTGCGTTCTTCTGGATTCAAGTTTAGTGATGATTGGGCTTCTGTTATAACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTGGGAACTCTTGGAGGAGATCCGTCTGAGACAACTGGGATTATTGAACTTGGTGGTGCTTCTGCTCAGGTAACCTTTGTATCAAGAGAAGCAATGCTGCCTTTGTTCTCACGCACTGTTAAATTTGGGAATATCACTTACAACCTTTACAGCCACAGTTTGCTTCATTTTGGCCTGAATGTTGCTCATGACTCATGGAGAGAAGCACTTATATCAGGAGATTTAAACCTGGCTTCTCAATATATTAAGGATGGGTTGCACATAGATCCTTGTACTCCGGCAGGGTATTCTTATAATGTGGATTCGTGGAAGTCCTCGCCTAGCTCACATAGTGAAGAAAGCCAAAATCAGCACACTGTTCAAACAAGGGGAAACTTTTCGGCGTGCAGATCTGCAGCATTGACCCTATTACAAAAGGGGAAAGAATCGTGTTCTTATCAGCATTGCGACATAGGATCAACTTTTATACCTAAGCTTCAGGGGAAATTTTTGGCTACAGAAAATTTCTTTCACACATCAAAGTTTTTTGGATTGGGGCCACGGGCTTATCTCTCCAATTTGATGACTGCTGGGCAAAAATATTGCGGAGAGGATTGGTTAAGGCTAAAAAAAAAGTATGTCTCACACGATGAGGAAGATTTACTTCGACATTGCTTCTCTTCTGCATACATTGTTGCTCTGCTTCATGACAGTCTTGGGATTGGTATGAATGATGAGAGGATCAAAGTTGCGAATCAGGTGAGAAATATTCCGCTCGATTGGGCTTTGGGAGCTTTTATTCTGCAAACTACAGCCGATACAGATCCACATAACCATAACTGGATTGCCGCCATTTTCAGCAATGAATCACCCACTCTCCTCACACTGGTTGGAATATTTATAATATTGTTGTTTACAGCATGGTCTATATCTAGGTGGAGAAAACCTCAGTTGAAGACAATTTATGACCTAGAAAAGGGGCGATATATAACTACAAGAGTTGCTAGGTAA 1638 0.4402 MRRLNARNRVGSNPNQMDPTVKRIQIRSTNLFARNNNSNSNSKCLCFKTTFIVPLFFSFLLILSYYTFFSSSSGARTRASFRYSIIVDGGSTGTRVHVFKYRVKNALDFGKKGVVTMRVNPGLSSFAEDPDGAGSSLSELVEFAKSRIPKERWRETEIRLMATAGMRMLDVEVQENIMDSCRRVLRSSGFKFSDDWASVITGSDEGVYAWVVANYALGTLGGDPSETTGIIELGGASAQVTFVSREAMLPLFSRTVKFGNITYNLYSHSLLHFGLNVAHDSWREALISGDLNLASQYIKDGLHIDPCTPAGYSYNVDSWKSSPSSHSEESQNQHTVQTRGNFSACRSAALTLLQKGKESCSYQHCDIGSTFIPKLQGKFLATENFFHTSKFFGLGPRAYLSNLMTAGQKYCGEDWLRLKKKYVSHDEEDLLRHCFSSAYIVALLHDSLGIGMNDERIKVANQVRNIPLDWALGAFILQTTADTDPHNHNWIAAIFSNESPTLLTLVGIFIILLFTAWSISRWRKPQLKTIYDLEKGRYITTRVAR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1887g00033 545 Gene3D - 82 476 - -
Vivi1887g00033 545 Pfam GDA1/CD39 (nucleoside phosphatase) family 80 481 IPR000407 GO:0016787
Vivi1887g00033 545 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 51 485 IPR000407 GO:0016787
Vivi1887g00033 545 Gene3D Exopolyphosphatase. Domain 2 201 464 - -
Vivi1887g00033 545 CDD NBD_sugar-kinase_HSP70_actin 85 243 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1887g00033 11 479 Nodulin-like Gene Family AT4G19180 26.400 1.62e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1887g00033 K01510 - gmx:100807287 760.37