Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1887g00007 ATGGCAGACAGTGTGGTTTCATTCCTTTTGGAACACTTGTCCCAATTGCTGCAACGCGAAGCTAATTTGCTGTGTGGAGTGGAAGACAAAATCATATCCCTCCGTAACGAACTTGAAATCATAAGCGTATACCTCAAAACATCTTCTGAAGGGAAGAACAACAACAACAAACAGATTGAACAAAAGGTTCTGAGTCAGATCAGAGATGTCTCCCACGTAGCCGAGGATGTGATTGACACATTCATAGCCAATGTTGCTATCTACAAGAAGAAAAACATGCTGGAGAGAATGCTTCACAGCGCTAATCATGCAAAGTTGCTCCGCGATGCAGCAGAGAAAATTGACAAGATCAAAACCACACTCAACGAGATACATGAAAACAAGATCAAATACTATCAAGAAAGCAGTGATCAATCAACATCAACAGCAGAAGAGGAGAATAGAATGAAATCTCTTCACAGATTAAGAAGAAACGTGGAGGAGGAAGATGTAGTGGGCTTTGTCCATGAATCCGAGGTAGTCATCAATAAACTCGTAGAGGGTGGTTCGTCGCGACTCAAAGTTGTTTCAATTATTGGTATGGGTGGATTGGGAAAAACCACACTGGCACGAAAAGTCTATAACAGTGATGAGGTAAAGAAGCACTTCAACTGCCGCGCATGGGTTTATGTGTCAAACGAATGTAGGGCCAGAGAGCTTTTGCTTGGTCTTCTTCAAAATTTGATGCCAAACCATAATTATGAATGTAGAAGCAGCAACATCAAAAAGGGTGAGAAGAAACACAAGGAAGCTGGGAATAATTCTCAAGACATCTCTAGCTTAAGTGATGATGAGCTCAAGAAAAGAGTGAGGGAATGCTTGAAGTGGAAAAAGTATTTGTTGGTTCTTGATGACTTGTGGAAAATACAGGATTGGGATGAAGTAAAAGATGCTTTTCCCGATGGAAATAGAGGAAGCAGAATATTGATAACCAGTCGTTTGAAAGAAGTTGCCTCGCATACCGGTCGAGATCCTCCTCACTATCTTCAATTTCTCAGTGAAGAACAAAGTTGGGAGCTCTTTTCTAAAAAAGTATTTAGAGGAGAAGAGTACCCTTGTGATCTTGAGTCTCTAGGCAAACAATTTATTAAAAGTTGTGGCGGTTTGCCACTCTCAATTGTGGTTCTTGCAGGACTTCTCGCAAATAAGGAAAAGTCGCAAAGAGAATGGTCCAAAGTGTTGGGTCATGTTAATTGGTATCTTACTCGAGACGAGACTCAAGTAAAGGATGTTGTACTTAAACTCAGTTTCGACAACTTGCCTTCAAGACTGAAACCGTGTTTTCTGTATTTAGGTATATTCCCTGAAGATTCCGAAATACATGTTAGGAGATTGTTGCAACTATGGATGGCGGAAGGATTTATACAAGAAACAGGAAGTAGAGATGCCTATGATGTTGCTGAAGACTATTTGTACGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACGAGTGAACAAAAGTGGAGGCATGAAAAAATGTCGCATCCATGATCTTCTCCGAGATCTCTGCATATTAGAGAGCAAAGAGGATAAGATCTTTCAAGTTTGCAATGACAACAACATCTTAATCCCTACAATACCTCGTAGATTGTCCGTCCATTCTAACATGTCTCATTATACTTCTTCAAGCACTAATGACCATTCATGTGTTCGCTCTTTGTTTTGTTCTGACTTAAATTGCTTCATTTCTCATGATGAGTGGAAATGGCTTACCAAAGGCTTCAAATTGGTCCGGGTGTTAGATCTTGAAGGAAAGTGTGTTTTTAAGATTCCAGCAAACTTAGGGAACTTCATTCACTTGAGGTACTTACGAATAGACTCAGAATATATTAGAAGTGTTCCAGATTCTATATGTAACCTTCAGAATCTACAAACATTAGACTTTGGACCTTTAACCACGATCCTCACAATTTCTTTCCCATGTGGAATATCAAAGCTCAAGCATCTAAGACATGTGTATACTTTTGGTCCGATCATGCTACGCGGCCGTTATTTAGAATCAAATGGTAATGTAATGTGGAATCTTCAAACAATCACTTCCATTGTACTCAATAAGAAAACAACATATCTAATAGAGAAAGGAAGTTTCCCCAAAGTAAGAAAATTAGGATTGCATATCTCCTCAAACTTCAAGGGTGATGTGCCCAAAATGTTGCTAAGCCTTCAACAATTGAAACATTTGGATAAGCTAGAAATCATATTCAAAGATAAAGACTGGCCACACTCGCGATGGGATATCAATTATAAGCCCGAGGAAATTTTACAAAGTTTGAAGCACTTGAGCCATTTGAGAAGATTGAAAATTACCAATGCACATGACCTTGTAACATGTGTAGCCATGTTTCCTCCCAACATTACCAAATTAACATTGAGAGGTATTTCTTGTTTGAATGACGATGGAATAAATTCTATTGGAAATCTCACCAAACTCCAAAGTTTGATCTTAATTGGAAACCACGATTGTTCTTGGCCTTCAGATTCATTTTTTGATCTTAATTATGTTGAAGATGGGTTCCCACAGTTGCAGGCATTTCAAATGGGAAATTTGCCAATCCGAAACTGGAAACTAGCTAATGGTTCCATGCCACGCCTTCACATTCTAGATATTCATGAATGCAATAAGTTGATTAATCTCCCAAGTGAACTATGGTCTTTGACAACCTTAAGAAAAGTATGTGTTCGGAGACCTTCCAATGCTATGGCTGCAATGCTACAAAATTTAGAAGTTGAGAATGGATGTGAGGTCATTGTAGAATAA 2799 0.3898 MADSVVSFLLEHLSQLLQREANLLCGVEDKIISLRNELEIISVYLKTSSEGKNNNNKQIEQKVLSQIRDVSHVAEDVIDTFIANVAIYKKKNMLERMLHSANHAKLLRDAAEKIDKIKTTLNEIHENKIKYYQESSDQSTSTAEEENRMKSLHRLRRNVEEEDVVGFVHESEVVINKLVEGGSSRLKVVSIIGMGGLGKTTLARKVYNSDEVKKHFNCRAWVYVSNECRARELLLGLLQNLMPNHNYECRSSNIKKGEKKHKEAGNNSQDISSLSDDELKKRVRECLKWKKYLLVLDDLWKIQDWDEVKDAFPDGNRGSRILITSRLKEVASHTGRDPPHYLQFLSEEQSWELFSKKVFRGEEYPCDLESLGKQFIKSCGGLPLSIVVLAGLLANKEKSQREWSKVLGHVNWYLTRDETQVKDVVLKLSFDNLPSRLKPCFLYLGIFPEDSEIHVRRLLQLWMAEGFIQETGSRDAYDVAEDYLYELIDRSLIQVARVNKSGGMKKCRIHDLLRDLCILESKEDKIFQVCNDNNILIPTIPRRLSVHSNMSHYTSSSTNDHSCVRSLFCSDLNCFISHDEWKWLTKGFKLVRVLDLEGKCVFKIPANLGNFIHLRYLRIDSEYIRSVPDSICNLQNLQTLDFGPLTTILTISFPCGISKLKHLRHVYTFGPIMLRGRYLESNGNVMWNLQTITSIVLNKKTTYLIEKGSFPKVRKLGLHISSNFKGDVPKMLLSLQQLKHLDKLEIIFKDKDWPHSRWDINYKPEEILQSLKHLSHLRRLKITNAHDLVTCVAMFPPNITKLTLRGISCLNDDGINSIGNLTKLQSLILIGNHDCSWPSDSFFDLNYVEDGFPQLQAFQMGNLPIRNWKLANGSMPRLHILDIHECNKLINLPSELWSLTTLRKVCVRRPSNAMAAMLQNLEVENGCEVIVE 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1887g00007 932 Gene3D - 344 429 IPR042197 -
Vivi1887g00007 932 CDD RX-CC_like 2 124 IPR038005 -
Vivi1887g00007 932 FunFam Probable disease resistance protein At1g63360 430 519 - -
Vivi1887g00007 932 FunFam Probable disease resistance protein At1g61300 146 339 - -
Vivi1887g00007 932 Gene3D - 148 337 IPR027417 -
Vivi1887g00007 932 PRINTS Disease resistance protein signature 188 203 - -
Vivi1887g00007 932 PRINTS Disease resistance protein signature 379 393 - -
Vivi1887g00007 932 PRINTS Disease resistance protein signature 873 889 - -
Vivi1887g00007 932 SUPERFAMILY L domain-like 508 907 - -
Vivi1887g00007 932 PANTHER DISEASE RESISTANCE PROTEIN RP 58 860 IPR044974 GO:0006952
Vivi1887g00007 932 Coils Coil 107 127 - -
Vivi1887g00007 932 Gene3D Ribonuclease Inhibitor 534 928 IPR032675 -
Vivi1887g00007 932 Gene3D - 430 519 IPR036388 -
Vivi1887g00007 932 Pfam NB-ARC domain 172 430 IPR002182 GO:0043531
Vivi1887g00007 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 444 IPR027417 -
Vivi1887g00007 932 Coils Coil 142 162 - -
Vivi1887g00007 932 Pfam Rx N-terminal domain 5 86 IPR041118 -
Vivi1887g00007 932 Gene3D - 5 104 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1887g00007 175 516 WRKY Transcription Factor Family AT5G45050 23.768 2.25e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1887g00007 - - mtr:25492796 1535.39