Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1887g00001 ATGGAGACAGAAAGCCGGCTCCAAGTTTCATCAATTTCAAGTCAGCACAAAGAAGGAACATCTTTTATCAAAACTTGTTTCAATGGACTCAACGCCATAGCAGGAATTGGAATCCTCTCAATGCCATATGCAATTTCTCAAGGAGGATGGATAAGTTTCATGCTTCTGATTATTTTTGCCATGATATGTTGGTACACAGCTATACTTCTAGGAAGGTGCATGAATCAACAACCACTAATCAAATCCTATACTGACATAGCCATGGCTGCTTTTGGCTACAAAGGAAGAGCTTTGATAGCAACTTTCTTCTATCTAGAGCTTTTTTTAATTCTTGTGGAGCTTCTTATATTAGAAGGTGACAATTTGGACAAGCTGTTTCCAAATATGAGCTTCACAATGGTTGAACTTAAAATTGGAAGTAAAAGTGGCTTTGTATTAATCACTGCTTTGATAGTATTGCCAACAACTTGGCTGAGAAGCTTGGGAGCTTTGGCCTATATATCTTTTGGTGGGATAGTAACTTCTTTGGTTTTGATTGGTTGTATTGTGTGGGTGGGTGAAGTGGATGGTGTTGGGTTTCATGAAAGAGGAAAGTTAGTGAATTTGGGAGGTTTGTCTACTTCTATGAGCCTTTTTGCTTTCTGTTACTGTGCTCATGCATTGATGCCAACAATATGCAATTCTATGAAGGATAGAAATCAGTTTTCTAAGGTTTTGCTGGTTTGCTTTGTTGCAAGCACGGCTATTTATGGAACCATAGCAATACTAGGCTACATGATGTTTGGAGATAATTTGAAATCTCAAGTCACATTAAATCTACCAACAAATAAAATAAGTACAAAAATAGCAATATATACCACAGTAATTAATCCTTTCACAAAGTATGCTATTATAATCACTCCAATAATGAATGCCATTGAGGAAAAATGGCATCTGTGCAAGAGAAGACCTATCAGCATTCTCATTAGAACCACCATTGTGGTCAGCAGTGTACTAGTGGCACTATTTGTTCCATTTTTTGGATACATTATGGCATTTATTGGTGCTTTCTTGAGTGTGGCCATCTCATTATTGTTTCCTTGTCTCTGCTACTTGAAGATGCACAAAGCTGCAAGGAGATTGGGGTTAGAGTTGATTATAATTATAGCAATTATAGTCATTGGTACATTTATTGGAATACAAGGTACCTATATTTCAGTTGTGCAAATAGTAAATAATGTAAAAACATGA 1230 0.365 METESRLQVSSISSQHKEGTSFIKTCFNGLNAIAGIGILSMPYAISQGGWISFMLLIIFAMICWYTAILLGRCMNQQPLIKSYTDIAMAAFGYKGRALIATFFYLELFLILVELLILEGDNLDKLFPNMSFTMVELKIGSKSGFVLITALIVLPTTWLRSLGALAYISFGGIVTSLVLIGCIVWVGEVDGVGFHERGKLVNLGGLSTSMSLFAFCYCAHALMPTICNSMKDRNQFSKVLLVCFVASTAIYGTIAILGYMMFGDNLKSQVTLNLPTNKISTKIAIYTTVINPFTKYAIIITPIMNAIEEKWHLCKRRPISILIRTTIVVSSVLVALFVPFFGYIMAFIGAFLSVAISLLFPCLCYLKMHKAARRLGLELIIIIAIIVIGTFIGIQGTYISVVQIVNNVKT 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1887g00001 409 Pfam Transmembrane amino acid transporter protein 19 397 IPR013057 -
Vivi1887g00001 409 PANTHER AMINO ACID TRANSPORTER 14 390 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1887g00001 2 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.743 9.20e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1887g00001 K15015 - gmx:100812006 585.874