Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1876g00001 ATGGCATGCCTGTGCTGGACCTTTGGTTTCTTTGCCACCTGTTGGAAGTCTTGTGTGGTTTACTTTCCTCAAGGACACGGCGAGCAAGTTGCAGCTTCCATGCAAAAGCAGACCGACTTCATACCTAGTTATCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCGCAATGTTGCCTTGCATGCTGATCCTGAAACTGGCGAAGTCTATGCACAGATGACTCTTCAACCTGTAACCAAATATGACAATGAGGCAATACTGGCATCAGACTTTGGCCTCAAACAAAACCGTCAACCGACCAAATTCTTTTGCAAGTCTCTAACAGCTAGTGACACAAGGACTCATGGTGGATTTTCTGTTCTTCGTAGAGTAGCTGAGAAAATATTCCCACCTTTGGTATGTATACAATATTATCGTTTTTCTGGATTCATGTTAGCAAAATTTGGTTGA 450 0.4311 MACLCWTFGFFATCWKSCVVYFPQGHGEQVAASMQKQTDFIPSYPNLPSKLICMLRNVALHADPETGEVYAQMTLQPVTKYDNEAILASDFGLKQNRQPTKFFCKSLTASDTRTHGGFSVLRRVAEKIFPPLVCIQYYRFSGFMLAKFG 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1876g00001 149 SUPERFAMILY DNA-binding pseudobarrel domain 93 141 IPR015300 -
Vivi1876g00001 149 Gene3D - 100 141 IPR015300 -
Vivi1876g00001 149 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 133 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1876g00001 17 132 B3 DNA Binding Superfamily AT1G19220 83.621 1.34e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1876g00001 K14486 - vvo:131643053 315.849