Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi186g00042 ATGGCACCACCAAAGCGACTCCGCATCACTCCGCTCGACGATCCACCCACCGCCTCCTCTTCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGAAGATTCAGAAAAAGCGGGAGAAGAAACTGAAGAAGATGAAGATGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAAAAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGACTCCGGCTCCGAATCGGAATCTGGTTCCGAATCCGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCTCGCATCAAAGCCCATGAAAGCCCAACCACAAGCCCAAACCCAATCTACTCCTGTACCGGCCAGATCTGGAACAAAACGTGCAAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACAACCGGCGCCGGCGGTGGTTCTGAAAACGAGGCGGATGGAGACGGTGACGTGAAAATGACAGGGGAAGACTCAAAGAAGATGAATCAGAGAGTCTTCACTGAAGGAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATTTCCAAAACCGGAAAGGATCCGATGAAGGAACTGGTCGAATTTCATAGTTTTGTGAAGAAATCTATTCACGGGGATGTGACTACCGAACAGCTGAAGCGAAAGGTCCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTGGTTTCACTAAAGAGCATGATAAGAAAGCTTTTGAACTTTCCAAAAAGGTTTGGGGCAATACTGAAGGCAATAATAACGTAGGCAATGAAGGGGAAGAAAATGGAAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAAAAGTTGTCAATGGTGCTGGAAAAGATGAGGGTGGTGTTGATAGAAGCTTGGCTTTGAGTGAAATGTGTAGATTTGGTGAAGCTGCACCCTTGAATGCTATGGAAAGGGGAATAGGATTGTTGGAGGAGTCCATGGTTGATGAGTTTAACGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTAGTGACCCGGCGGCAACTGCTTACGGATCAGGCTAGGATAGCATTGGACGCGTTGAAGAAGACGCGTTGA 1182 0.4679 MAPPKRLRITPLDDPPTASSSSDDDQPPSSKKPEDEVVDEEEDSEKAGEETEEDEDEGSSSEEEQVQPPSKNPPPSTPISNPKPDSGSESESGSESESDSEQEPTPPNAKVKPLASKPMKAQPQAQTQSTPVPARSGTKRANENGSKPAKKKTTGAGGGSENEADGDGDVKMTGEDSKKMNQRVFTEGDEIAILKGLADFISKTGKDPMKELVEFHSFVKKSIHGDVTTEQLKRKVRGLKMKFKDGGGFTKEHDKKAFELSKKVWGNTEGNNNVGNEGEENGKVNEKTPKSTKKEAPVRNNGSAKKEKVVNGAGKDEGGVDRSLALSEMCRFGEAAPLNAMERGIGLLEESMVDEFNEGWRKVQIAEMELLVTRRQLLTDQARIALDALKKTR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi186g00042 393 MobiDBLite consensus disorder prediction 1 181 - -
Vivi186g00042 393 MobiDBLite consensus disorder prediction 164 181 - -
Vivi186g00042 393 MobiDBLite consensus disorder prediction 36 62 - -
Vivi186g00042 393 Pfam Protein of unknown function, DUF573 182 266 IPR007592 GO:0006355
Vivi186g00042 393 PANTHER BNAANNG10740D PROTEIN-RELATED 79 388 IPR007592 GO:0006355
Vivi186g00042 393 MobiDBLite consensus disorder prediction 120 143 - -
Vivi186g00042 393 MobiDBLite consensus disorder prediction 280 302 - -
Vivi186g00042 393 MobiDBLite consensus disorder prediction 262 316 - -
Vivi186g00042 393 MobiDBLite consensus disorder prediction 265 279 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi186g00042 8 390 GeBP Transcription Factor Family AT1G61730 29.440 8.05e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi186g00042 DUF573 1.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi186g00042 - - vvo:131633905 534.258