Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi186g00030 ATGATTATTTCAAAGCTAATGCCAGAAGAACATGAAATACATGAAACTACCCAAGTGCTTGGTACATTTGGCTATTTTGACCCGGAGTATACATCGACGGGAAAATTGACTCTACAAAGCGATGTTTATGCTTTTGGTGTTGTTCTTCTAGAGCTTTTGACAGGACGTCAAGCTATAGATCTAAACCAAGGTCCAAATGATCAAAACCTTGTACTACAAGTAAGGCACTTACTGAATGACCGCAAGATGCTCCGTAAGGTGATTGATCCAGAGATGACTAGAAATTCATACACCATTGAATCGATATTCATGTTTGCGAATCTTGCGTCACAATGTGTTCGTCCTGAGAGTCATGTGAGACCTTCAATGATTGATTGTGTTAAAGAAATTCAAATGATTATCTATAGAAATGCAAAAGGGTTGGGAATGGTTATGCATAGTTTGAGGATGCTCTAG 456 0.3838 MIISKLMPEEHEIHETTQVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRQAIDLNQGPNDQNLVLQVRHLLNDRKMLRKVIDPEMTRNSYTIESIFMFANLASQCVRPESHVRPSMIDCVKEIQMIIYRNAKGLGMVMHSLRML 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi186g00030 151 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi186g00030 151 SUPERFAMILY Protein kinase-like (PK-like) 4 137 IPR011009 -
Vivi186g00030 151 PANTHER OS01G0750732 PROTEIN 4 135 - -
Vivi186g00030 151 Gene3D Transferase(Phosphotransferase) domain 1 2 143 - -
Vivi186g00030 151 Pfam Protein kinase domain 12 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi186g00030 3 133 Receptor kinase-like Gene Family AT4G02010 41.221 3.83e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Vivi186g00030 Pkinase 2.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi186g00030 - - vvo:131626054 302.367