Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi186g00026 ATGAAAGCTAAGAGTGGCCTCTTTGCAGGGTCTCTTAACAGCAATGAACTTGTTATCATCCAAGAACACAATGAGCCTAAGACAGTGAAGAACTTGGACGGTCAAGTATGTGAGATATGCGGTGATTCTGTAGGTCGTACAGTGGATGGAGATTTGTTTGTAGCTTGTGAAGAGTGTGGCTTCCCTGTCTGCAGGCCATGCTATGAGTATGAAAGAAGAGAAGGCACACAAGTTTGTCCTCAGTGCCATACAAGATACAAGCGTATCAAAGGTAGTCCAAGAGTGGTGGGAGATGAAGATGAAGAAGATGTGGATGATATTGAACAAGAATTTAAAATGGAAGAGGAAAAGTACAAGCTTATGCATGAAGAGGATATGGATAGTAGAGATGATGATGAGAATACTAAATATAGAGAGCAGCCCGGTGATGCATATTTAGATCAGAAGGAGAAAACAGATGAGTGGAAGTCGCAGCAAGGCAATCTGTTGATTGAAACTGATGCAGTTGATCCTGAAAAGGCCATGAAAGATGAAACCAGACAGCCACTTTCGAGGAAAGTGGCAATACCTTCAGGAAAACTGAGTCCTTATAGAATGATGGTTGTGGCTAGGCTCATCCTTCTAATACTCTTCTTCGAGTACAGAATCTTCCATCCAGTACATGAAGCAGTTGGACTATGGTTCATATCAGTATCATGTGAAATCTGGCTTGCATTATCATGGATGGTTGATCAGATTCCTAAATGGTTCCCTATTGATCGCGAAACATATCTCGACCGTCTTTCAGTCAGGTTTGAACCGGAAAACAAGCCGAATATGCTTTCTCCAATAGATATCTTTGTAACAACGGTAGATCCAATCAAGGAACCACCCCTTGTTACAGCAAATACTATTCTTTCAATTTTGGCACTAGATTATCCTGCGCGCAAAATTTCATGCTATGTTTCTGATGACGGTGCTTCCATGCTCACCTTCGAAGCTCTTCAAGAAACGGCTGAATTTGCGCAAAAATGGGTACCTTTCTGTAAACAATTCTCTGCGGAACCTCGAGCTCCCGAGAAGTACTTCTCTGAGAAGATAGACTTTCTGAAGGACAAGGTTCAAACCACATATGTAAAAGAACGCCGAACTATGAAGAGAGAATATGAAGAATTTAAGGTCAGAATAAATGCACTTGTGGCTAAATCCATGAGAGTTCCATCCGGAGGATGGTGCATGAAAGACGAAACACCGTGGCCAGGAAACAATTCAAAAGATCATCCAAGTATGATTCAAATTCTACTTGGTCATAATGGTGGTGACAATGAAGGGAATGAACTTCCATCTCTTGTCTACATCTCTAGAGAGAAAAGGCCTGCATTTCAACATCACACAAAAGCTGGTGCAATGAACGCGCTGCTTCGCGTATCAGCAGTGTTGAGCAATGCTCCTTTTGTGCTCAACTTGGATTGCAATCATTATGTGAACAACAGCAAGGTTGTGAGAGAAGCCATGTGTTTCTTTATGGACATACAACTTGGGAATAGTATAGCTTTTGTTCAGTTTCCTCTAAGATTCGATAGCCTTGATAAGAATGACCGATACGCCAACAAAAACACCATTTTATTTGATATTACCCTGAGGTGTCTAGATGGAATTCAAGGACCTGTTTATATTGGATCAGGTTGTATATTCAGAAGGAAAGCTTTAAATGGCTTTGAACCTCCTAAGACAACGAAACGCTCTCAAGTCGTACAAGTTCACTCAAAACAGGATGAAAATGAAGAGGATGCAAGCATCATAGAAGCAACTGATGAAGACAAGCAGCTATTGCAATCAGATATGAACACTGAAGATAAATTTGGAAAGTCTACACTTTTCATGAATTCTTCATTATCAGAAGAAGGTGGTGTAGATCCTTCTTCAACTCAGGAAGCCTTGCTTAAAGAAGCCATTCATGTCATGAGCTGTAGCTACGAAGACCGAACTCTTTGGGGATACGAGGTTGGTATGAGCTATGGATCTATAGCGGCCGATACTCTAACAAGTTTGAAAATGCATACTCGTGGTTGGAGATCGGTATACTGCATGCCAAAGAGAGCTGCATTTAGGGGAACAGCACCAATCAATCTCACAGAAAGACTTGACCAAGTTCTTAGATGGGCAGTAGGATCACTCGAAATCCTATTCAGCCGCCACTGTCCATTGTGGTATGGTTTTAAAGAAGGAAGACTCAAGGTTCTCCAGAGAATTGCCTATATTAACAGTACTGTCTACCCTTTTAGTGCATTACCTCTCATCATCTATTGTATCGTTCCCGCCGTCTGCTTGCTTACTGATAAATTCATCACACCATCGGTTGGAACTTTTGCGAGTCTAGTATTCATTTCTCTATTCATCTCAATCTTCGCATCGGCTATTCTTGAATTGAGATGGAGTGGAGTTAGTCTCGAGGAATGGTGGAGAAATCAACAGTTTTGGGTGATTGGAAGTGTATCAGCGCACCTCTTTGCAATCACACAGCGCCTAATGGGAGGATTCATTGGAAAAATTAATGATCATTTCAGCATTGTATCGAAGGCGCCTGACAGCGACGGGCAGTTTAACGAGCTCTACACGATTAGATGGACAGCACTACTAATACCTCCAACAACAGTCACAATAATCAACCTTATTGGCATTGTGGCCGGTTTCACAGATGCTATAAATAGCGGTGAACATGAATGGGGACCATTGATTGGGAAACTGTTCTTCTCTTCATGGGTTATTGCTCATCTTTATCCTTTTCTTAAAGGACTAATGGGGAGACAGAATAGAACACCAACTCTAATTGTTATTTGGTCTGTGCTTTTGGCTTCTATATTCTCTTTGGTTTGGGTGAGAATTGATCCTTTTGTGTTGAAAACTAAAGGGCCTGATGTTAAACAGTGTGGGATTAGTTGTTGA 2925 0.4144 MKAKSGLFAGSLNSNELVIIQEHNEPKTVKNLDGQVCEICGDSVGRTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVVGDEDEEDVDDIEQEFKMEEEKYKLMHEEDMDSRDDDENTKYREQPGDAYLDQKEKTDEWKSQQGNLLIETDAVDPEKAMKDETRQPLSRKVAIPSGKLSPYRMMVVARLILLILFFEYRIFHPVHEAVGLWFISVSCEIWLALSWMVDQIPKWFPIDRETYLDRLSVRFEPENKPNMLSPIDIFVTTVDPIKEPPLVTANTILSILALDYPARKISCYVSDDGASMLTFEALQETAEFAQKWVPFCKQFSAEPRAPEKYFSEKIDFLKDKVQTTYVKERRTMKREYEEFKVRINALVAKSMRVPSGGWCMKDETPWPGNNSKDHPSMIQILLGHNGGDNEGNELPSLVYISREKRPAFQHHTKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNSIAFVQFPLRFDSLDKNDRYANKNTILFDITLRCLDGIQGPVYIGSGCIFRRKALNGFEPPKTTKRSQVVQVHSKQDENEEDASIIEATDEDKQLLQSDMNTEDKFGKSTLFMNSSLSEEGGVDPSSTQEALLKEAIHVMSCSYEDRTLWGYEVGMSYGSIAADTLTSLKMHTRGWRSVYCMPKRAAFRGTAPINLTERLDQVLRWAVGSLEILFSRHCPLWYGFKEGRLKVLQRIAYINSTVYPFSALPLIIYCIVPAVCLLTDKFITPSVGTFASLVFISLFISIFASAILELRWSGVSLEEWWRNQQFWVIGSVSAHLFAITQRLMGGFIGKINDHFSIVSKAPDSDGQFNELYTIRWTALLIPPTTVTIINLIGIVAGFTDAINSGEHEWGPLIGKLFFSSWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi186g00026 974 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 111 IPR013083 -
Vivi186g00026 974 Coils Coil 375 395 - -
Vivi186g00026 974 MobiDBLite consensus disorder prediction 117 157 - -
Vivi186g00026 974 Pfam Cellulose synthase 277 968 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vivi186g00026 974 SUPERFAMILY Nucleotide-diphospho-sugar transferases 289 762 IPR029044 -
Vivi186g00026 974 CDD mRING-HC-C4C4_CesA 35 85 - -
Vivi186g00026 974 MobiDBLite consensus disorder prediction 569 589 - -
Vivi186g00026 974 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 419 572 IPR029044 -
Vivi186g00026 974 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 179 941 - -
Vivi186g00026 974 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Vivi186g00026 974 SUPERFAMILY RING/U-box 22 105 - -
Vivi186g00026 974 FunFam Cellulose synthase 19 110 - -
Vivi186g00026 974 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Vivi186g00026 974 MobiDBLite consensus disorder prediction 117 156 - -
Vivi186g00026 974 Coils Coil 97 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi186g00026 1 974 Cell Wall Biosynthesis AT5G17420 63.592 0.0 1362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi186g00026 K10999 - gmx:100777270 1602.42