Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi186g00015 ATGCATAGCCTTGCAACCAAGACAGTATCTCTCTTCACCAACCACTCCCTTCCATACTCAAACACTCACCCCCCCTGTCCCTACAAACCCTCCATCCCGCCGGCGATTCCCCGATCGTTTCCGGCAACTCAAAATGCTAAACCAATGAATGAAGAGCCAACACCGGCTATCCTCATGCCTCTCTCTTGCGTCTCCGACTGTGACCTCCTCTGCGGAGAAGACACATCCGAAGTCCTCACCGGAGATTCAACTGAATACTCCTCCGATCTCGATTCATCGTCGCGGTCGTCGTCATTATTCGCGGAGGAGGAGGAATCCATTGCCGTTTTCATAGAACACGAGCGTAAGTTCGTCCCTGGATTCGATTACCTCTCAAGATTCCAATCTCGTTCTCTAGATGCCAACGCCAGAGAAGAATCAGTTGCATGGATTCTCAAGGTACATGCGTACTATGGTTTTCAGCCGTTGACGGGGTACCTTTCCGTTAACTATATGGATCGGTTTTTGGATTCTAGAACTTTACCGGAATCAAATGGATGGCCTCTGCAACTTCTATCAGTTGCATGTTTGTCTTTAGCAGCAAAGATGGAGGAACCCCTGGTTCCTTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTCAACCAAGAACGATTTTAAGAATGGAGCTACTTGTTCTAACTGTGTTGGATTGGAGGCTAAGATCAGTCACCCCACTTAGCTTCCTTAGTTTCTTTGCGTGCAAACTAGATTCAACTGGAGCATTCACTGACTTCCTCATTTCACGTGCTACAGAAATCATCTTATCTAATATCCAAGAAGCTGGCTTTCTTGCCTACAGGCCATCGTGCATTGCTGCAGCTGCAATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTTTTATTAAGCCTGAACATGCTGAGTCATGGTGCGAGGGCCTAAGAAAAGAAAAAATTATAGGGTGCTATGAGTTGATGCAAGAAGCCGTGGTAAGCAATAACCAAAGAAATCCACCTAAAGTATTGCCACAGCTGCGAGTTACAACTCGAACCCGAAGGTGGTCCAATGTCTCATCATCATCATCATCATCTCCATCTTCCTCCTCTTCACTCTCTTTCTCATTATCTTATAAAAAAAGGAAATTAAATAGTAACTGCTTCTGGGTAGATGATGACAAAGGAAACCCCGAGTGA 1203 0.4547 MHSLATKTVSLFTNHSLPYSNTHPPCPYKPSIPPAIPRSFPATQNAKPMNEEPTPAILMPLSCVSDCDLLCGEDTSEVLTGDSTEYSSDLDSSSRSSSLFAEEEESIAVFIEHERKFVPGFDYLSRFQSRSLDANAREESVAWILKVHAYYGFQPLTGYLSVNYMDRFLDSRTLPESNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFQPRTILRMELLVLTVLDWRLRSVTPLSFLSFFACKLDSTGAFTDFLISRATEIILSNIQEAGFLAYRPSCIAAAAILSAANEIPNWSFIKPEHAESWCEGLRKEKIIGCYELMQEAVVSNNQRNPPKVLPQLRVTTRTRRWSNVSSSSSSSPSSSSSLSFSLSYKKRKLNSNCFWVDDDKGNPE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi186g00015 400 FunFam D2/4-type cyclin 120 237 - -
Vivi186g00015 400 Pfam Cyclin, N-terminal domain 107 236 IPR006671 -
Vivi186g00015 400 SUPERFAMILY Cyclin-like 220 334 IPR036915 -
Vivi186g00015 400 SMART cyclin_7 142 230 IPR013763 -
Vivi186g00015 400 PANTHER CYCLINS 83 337 IPR039361 -
Vivi186g00015 400 Pfam Cyclin, C-terminal domain 239 347 IPR004367 -
Vivi186g00015 400 CDD CYCLIN_AtCycD-like_rpt2 239 329 - -
Vivi186g00015 400 CDD CYCLIN_AtCycD-like_rpt1 136 234 - -
Vivi186g00015 400 Gene3D - 120 237 - -
Vivi186g00015 400 SMART Cyclin_C_2 239 368 IPR004367 -
Vivi186g00015 400 Gene3D - 110 300 - -
Vivi186g00015 400 SUPERFAMILY Cyclin-like 103 236 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi186g00015 59 395 Core Cell Cycle Gene Families AT1G70210 60.472 1.06e-128 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi186g00015 K18810 - gmx:100778578 502.286