Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi186g00001 ATGGCAGCTTGCACTGTCTACTCAACACAATCCTTAAGAACAAACATCTCAACTCCAACATCATCAAAAGCAAATGTTGCCTTCCATCAAAAACAAGTACTTTTCTTCACAACAAACAAGAAAAGCAGCAACAGAAGAGCAAACAGCAACAAAAGATACTTGATAACATGTGCAGCAGGAGACTCACAGACAATTGTGATAGGTCTAGCAGCTGATTCAGGCTGTGGAAAAAGCACTTTCATGAGAAGACTCACAAGTGTGTTTGGAGGAGCAGCTGAGCCACCAAAAGGTGGTAATCCTGATTCAAACACTCTTATAAGTGACACAACCACTGTGATATGTTTGGATGATTATCATTCTTTGGATAGAACTGGTAGAAAAGAGAAAGGTGTTACTGCACTTGATCCAAGAGCTAATGATTTTGATCTCATGTATGAACAAGTTAAAGCTATTAAAGATGGAAAATCTGTTCAAAAACCTATTTATAATCATGTTACTGGTCTTTTGGATGCTCCTGAGCTTATTAAACCACCAAAAATCCTTGTCATTGAAGGTCTTCATCCAATGTATGATTCTAGAGTTAGAGAACTCTTGGACTTCAGTATCTACTTAGACATTAGTAATGAGGTGAAATTTGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGACACAGTCTTGAAAGTATCAAGGCTAGCATTGAAGCAAGAAAGCCTGATTTTGAAGCTTTTATTGATCCACAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTACCAACTCAACTCATCCCCGATGATAACGAGGGAAAGATTTTACGAGTAAGGTTGATACAGAAAGAGGGTGTCAAATACTTTAGCCCAGTTTACTTGTTCGACGAAGGTTCAACTATTTCATGGATACCATGTGGAAGAAAACTCACATGCTCTTACCCCGGAATCAAATTCTTCTATGGACCAGAAACCTACAAAGGAAACGAGGTGTCAGTTGTGGAAATGGATGGACAATTTGACAGACTAGATGAACTTATATATGTTGAGAGCCATTTAAGCAACTTATCATCCAAATTCTATGGAGAAGTTACTCAACAAATGTTGAAGCATGCTGATTTCCCTGGTAGCAACAACGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTGTTTGAGCAGATAGTAGCAAGCAGGGCTGAGGCTCCAGTAGGAGCTGCTAAAGCTTAG 1233 0.3909 MAACTVYSTQSLRTNISTPTSSKANVAFHQKQVLFFTTNKKSSNRRANSNKRYLITCAAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKDGKSVQKPIYNHVTGLLDAPELIKPPKILVIEGLHPMYDSRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAFIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAEAPVGAAKA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi186g00001 410 CDD PRK 66 354 - -
Vivi186g00001 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 334 IPR027417 -
Vivi186g00001 410 PANTHER URIDINE KINASE 46 304 - -
Vivi186g00001 410 Gene3D - 61 295 IPR027417 -
Vivi186g00001 410 FunFam Phosphoribulokinase 61 291 - -
Vivi186g00001 410 ProSitePatterns Phosphoribulokinase signature. 215 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
Vivi186g00001 410 Pfam Phosphoribulokinase / Uridine kinase family 66 264 IPR006083 GO:0005524|GO:0016301
Vivi186g00001 410 PRINTS Phosphoribulokinase family signature 180 198 IPR006082 GO:0005524|GO:0005975|GO:0008974
Vivi186g00001 410 PRINTS Phosphoribulokinase family signature 233 256 IPR006082 GO:0005524|GO:0005975|GO:0008974
Vivi186g00001 410 PRINTS Phosphoribulokinase family signature 215 232 IPR006082 GO:0005524|GO:0005975|GO:0008974
Vivi186g00001 410 PRINTS Phosphoribulokinase family signature 71 88 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi186g00001 136 256 PRT Gene Family AT3G27190 33.871 5.18e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi186g00001 K00855 - gmx:100807126 734.176