Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1865g00002 ATGGCTGCAACTATGATAGGAGGTGCTTTTCTCTCTGCAACTCTTCAAACCTTAGTTGAGAAACTTGCTTCAACAGAGTTTCTTGATTATATCAGAAACACCAAGTTGGATGTCTCCCTCTTAAGAAAGTTACAAACAAACTTGCTCACTCTTCAGGCTGTGCTGGATGATGCAGAAGAAAGGCAGATCAACAATCTTGCTGTCAAAAAATGGCTAGATGACTTGAAAGATGTTGTCTTAGATGCTGAGGATTTGGTCAATGAAATAATTTACGACTCCCTTCGGTGCAACATGGAGAATACTAAAGCTGGAAACAGAACTAATAAGGTGTGGAACTTTCTTTCATCTCCTTTCAAAAACTTCTATATAGATATGAATTCCCAATTGAAGATCATGTGTGAAACACTTGAACCTTTTGCACAACATAAAGATACCCTTGGATTGCAAACAAAAACTGCTAGAGTTTCTCGAAGACCACCTTCAAGTTCAGGGGTTAATGAATCTGTCATGGTCGGTAGGAATGATGATAAAGATACAATCATCAATATGCTTGTATCAGACTGTGGCACCAGCAGAAGTAATAACTTAGGTGTTGTTGCAATTTTGGGTATGGGAGGTGTCGGAAAAACAACTCTTGCACAACTGGTCTACAATAATGAAAAAGTTGAACAACATTTTGATTTCAAAGTCTGGGTTTGTGTATCAGAGGACTTCGATGTTGTGAGAGTAACCAAGTCTCTCCTTGAATCTGTTGTTAGAAATACAACATCAGCTGCTTCAAAAGTCTGGGAAAGCGATAACCTTGATATTCTTCGAGTTGAATTAAATAAAATCACGAGGAAGAAAAGATTTTTGTTTGTGCTGGATGATTTGTGGAATGATAGTTACAATGATTGGGATGAGCTAGTAAGTCCTCTTGTTGATGGAAACCCTGGAAGTTCGGTGATTATAACAACGCGTCAACAAAAAGTTGCAGAGATGACAAAGACATTTCCTATTTTTAAATTAGACCCTCTGTCACATGAAGATTGTTGGTCTATACTCTCAAAACATGCATTGGGTAGTGATGAACATCATCCTAGTAAGAACACAACCCTTGAAAAGATTGGTAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATAGCTGCAAAAACTCTGGGAGGACTTCTACGCTCAAGGGTAGACACAATGGCGTGGACTGATATTTTGAACAGCAATGTATGGAACTTACCAAATGATAATATTATGCCTGCATTACATTTGAGTTACCAATATCTTCCCTCTCATTTGAAAAGATGTTTTGCATATTGTTCAATTTTTCCAAAAGATTATCCACTTGATAGGGAGAAATTGGTTTTGTTGTGGATGGCAGAGGGCTTCCTTGATTATTCTGACGAGGTAAAATTGCCAGAGGAAGTAGGTGATGGTTGCTTTGCTGAATTATTGTCTAGGTCCTTAATTCAACAATCAAATGATGGTGCTCCTGGAAAATTGTTTGTCATGCATGACCTTATAAACGACTTAGCTACATCCGTATCTGAAAAAATTTGTCGTAGGCCTGAATGTGGTGACATTCCTGAAAAGGTTCGACATTTATCATATAATCAAGAAGCGTATGATATTTTCATGAATTTCAAGCATTTATACAATTTAAAATGCTTGCGAAGCTTCCTACCCATTTCTAGTAATTGGTTTAGAGCTGCCTTGTCCATTAAGGTGGTTGATGATTTGTTGCCAACATTCAAAAGGTTGCGGGTGTTATCGCTTTCAAAGTATGTAAACATCACCAAGCTACCAGATTCAATTGGTTGCTCCAGTCTCACTGAATTGCCAGTGCATATGGGAAATTTAATCAGCTTACGTCACCTTGATATAAGTGGGACTGCCATAAAAGAGTTGCCTATGGAAATTGGTGAGCTAGAAAACCTCCAAACTTTGTCTGTTTTTTTAGTGGGTAAGCGAAATAAAGGGTTAAGTATCAAAGAACTAGGGAAATTCCCAAACCTACAAGGAAAATTTACCATAAAAAACCTTAACAATATCGTTGATGCAAAAGAGGCAGAAGAAGCCAACCTGAAAAACAAAGAGAAAATTGAGGAGTTAGAGCTAATATGGGGAAAACAAAGTGAAGATTCACTGAAAGTGAAAATTGTGCTCGAAATGTTGCAACCACCAATAAACTTGAAGAGCCTGGTCATTGATTTGTATGGAGGGACAAGTTTTCCGAATTGGTTGGGAAATTCTTCATTTTCTAACATGGTGTCCATTGAGATTCGTAATTGTGAATACTGCATGACACTTCCACCGCTAGGCCAACTACCTTCCCTCAAGAAGCTTAGTATATCGAATTTGTTGTTATTGGAGACCATTGGCCCAGAGTTCTATTGTGTTGAGGAAGGAGAATGTTCCAGTTCTACCTTCCAACCATTTCCTTCCCTTGAGCATATGAAATTTCACAGCATGCCAAATTGGAAGGATTGGATTTCCTTTGAAGGCATAAATTTTGCATTTCCTCGACTTAGAACTATGGTGTTACGTGATTGTCCTGTACTAACAGGAGATTTGCCTGACCACCTTTCATGCATGGAAGACATTGAAATAAAAGGTTGTTATAAGCTATTGGAAACTACCCATACTTTGAATTGGCTATCGGCAATCAAAATAGTGACAATTAAAAAAGATTTTAATCATGAAGTTTTTTCGACCGACTCTCCTTTGCAACATGCAGCTGCTGCTGAAAGTTACCCAATGTTTATTTCTAAAACAATCACGAGTAGTATTTGTCTTACTCACTTGAAACTCAGACATATTCAATCTCTTACTGCGTTTCCCACAAATGGTCTACCCGCTTCATTGCAGTCACTTGATATTGATGGGTGTAGGAAGTTATCCTTCATGCCTTTCGAAACATTTCAAAATTACACATCACTTGTGAGTCTTTATATGTGGGATAGCTGTGATTCACTTACATCATTTCCACTTGATGGTTTCCCTGCGCTCCAAACACTTTCCATTCATGTTTGTAGGAGTATGAATTCCATTTTTATTTCAGAAAGTCCTTCTAATCGGCAGTCAACCCTCCAATCACTTAAAATCACATCAGTTGGATCACTTAATGTCAATCTTCGATTGGACACGCTCACCAATCTTGAACATTTGAATCTTTGCTGTCAGGGAGAGTTGTCATTTTGTGAAGGAGTCTGTCTACCCTCCAAATTACAAACAATTGATATTTCTTTCGGAAGAACAAAGCCGCATGTAAATGAATGGTGTCTCCAAGACCTAACCGCTCTTTCAAGATTGAAAATTCAAGAAAGCGGTGAAATGGAAAACACCTCGACGGTCGCTTCGTTGCTCCCCATCTCCCTTGTGTCTCTCTGTGTCGGTGATAATATGTCCTTTGAAGGAAGTGGGCTTCGACACTTCTCCTCTCTCCAAAATCTCGACTTTGTTGATTGTCGACATCTAAAGTCATTGCCAGAAAACTGCCTTCCTTCCTCGCTGAAATCACTTCAATTTGATGATTGTAAACAACTAGAGTCATTACCAGAAGACAGCCTCCCTACCTCTCTTAAGCGGCTGACCATCAGAGATTGCCCTGTGTTAGAAGAAAGGTATAAAAGGAAGGAAAATTGGTCCAAAATTGCTCACATTCCTGTCATACAAATAAATGACCAACTCAAAATATGA 3693 0.3861 MAATMIGGAFLSATLQTLVEKLASTEFLDYIRNTKLDVSLLRKLQTNLLTLQAVLDDAEERQINNLAVKKWLDDLKDVVLDAEDLVNEIIYDSLRCNMENTKAGNRTNKVWNFLSSPFKNFYIDMNSQLKIMCETLEPFAQHKDTLGLQTKTARVSRRPPSSSGVNESVMVGRNDDKDTIINMLVSDCGTSRSNNLGVVAILGMGGVGKTTLAQLVYNNEKVEQHFDFKVWVCVSEDFDVVRVTKSLLESVVRNTTSAASKVWESDNLDILRVELNKITRKKRFLFVLDDLWNDSYNDWDELVSPLVDGNPGSSVIITTRQQKVAEMTKTFPIFKLDPLSHEDCWSILSKHALGSDEHHPSKNTTLEKIGRKIARKCGGLPIAAKTLGGLLRSRVDTMAWTDILNSNVWNLPNDNIMPALHLSYQYLPSHLKRCFAYCSIFPKDYPLDREKLVLLWMAEGFLDYSDEVKLPEEVGDGCFAELLSRSLIQQSNDGAPGKLFVMHDLINDLATSVSEKICRRPECGDIPEKVRHLSYNQEAYDIFMNFKHLYNLKCLRSFLPISSNWFRAALSIKVVDDLLPTFKRLRVLSLSKYVNITKLPDSIGCSSLTELPVHMGNLISLRHLDISGTAIKELPMEIGELENLQTLSVFLVGKRNKGLSIKELGKFPNLQGKFTIKNLNNIVDAKEAEEANLKNKEKIEELELIWGKQSEDSLKVKIVLEMLQPPINLKSLVIDLYGGTSFPNWLGNSSFSNMVSIEIRNCEYCMTLPPLGQLPSLKKLSISNLLLLETIGPEFYCVEEGECSSSTFQPFPSLEHMKFHSMPNWKDWISFEGINFAFPRLRTMVLRDCPVLTGDLPDHLSCMEDIEIKGCYKLLETTHTLNWLSAIKIVTIKKDFNHEVFSTDSPLQHAAAAESYPMFISKTITSSICLTHLKLRHIQSLTAFPTNGLPASLQSLDIDGCRKLSFMPFETFQNYTSLVSLYMWDSCDSLTSFPLDGFPALQTLSIHVCRSMNSIFISESPSNRQSTLQSLKITSVGSLNVNLRLDTLTNLEHLNLCCQGELSFCEGVCLPSKLQTIDISFGRTKPHVNEWCLQDLTALSRLKIQESGEMENTSTVASLLPISLVSLCVGDNMSFEGSGLRHFSSLQNLDFVDCRHLKSLPENCLPSSLKSLQFDDCKQLESLPEDSLPTSLKRLTIRDCPVLEERYKRKENWSKIAHIPVIQINDQLKI 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1865g00002 1230 PRINTS Disease resistance protein signature 377 391 - -
Vivi1865g00002 1230 PRINTS Disease resistance protein signature 948 964 - -
Vivi1865g00002 1230 PRINTS Disease resistance protein signature 198 213 - -
Vivi1865g00002 1230 PRINTS Disease resistance protein signature 278 292 - -
Vivi1865g00002 1230 MobiDBLite consensus disorder prediction 150 169 - -
Vivi1865g00002 1230 Gene3D - 423 512 IPR036388 -
Vivi1865g00002 1230 Gene3D - 159 331 IPR027417 -
Vivi1865g00002 1230 SUPERFAMILY L domain-like 501 889 - -
Vivi1865g00002 1230 Coils Coil 41 61 - -
Vivi1865g00002 1230 FunFam Probable disease resistance protein At1g63360 424 512 - -
Vivi1865g00002 1230 Coils Coil 676 705 - -
Vivi1865g00002 1230 Gene3D - 338 422 IPR042197 -
Vivi1865g00002 1230 Pfam Rx N-terminal domain 10 102 IPR041118 -
Vivi1865g00002 1230 PANTHER DISEASE RESISTANCE PROTEIN RP 41 870 IPR044974 GO:0006952
Vivi1865g00002 1230 Pfam NB-ARC domain 176 405 IPR002182 GO:0043531
Vivi1865g00002 1230 Gene3D Ribonuclease Inhibitor 913 1016 IPR032675 -
Vivi1865g00002 1230 FunFam Probable disease resistance protein At1g61300 153 330 - -
Vivi1865g00002 1230 Pfam FNIP Repeat 1158 1197 IPR008615 -
Vivi1865g00002 1230 Gene3D Ribonuclease Inhibitor 526 901 IPR032675 -
Vivi1865g00002 1230 Gene3D - 14 131 - -
Vivi1865g00002 1230 Gene3D Ribonuclease Inhibitor 1022 1216 IPR032675 -
Vivi1865g00002 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 438 IPR027417 -
Vivi1865g00002 1230 SUPERFAMILY L domain-like 928 1205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1865g00002 199 388 WRKY Transcription Factor Family AT5G45050 26.768 1.96e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1865g00002 - - tpra:123915821 1562.36