Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi185g00005 ATGCAGGTCAAGGACGTGGTCATCAATATTGACGAAAACCGTGAAATGTCTGAAATCCAATGGGAGAATGTTCAAACAAGCTTTGTTGGAGAGTCCAGCTCTAATGCCCATTCATCTCTCAAAGATGAGAATCACTCAAGTGAAATATCTGAAATCAAAGGGGAGACTGTTCAAACAAGCTTTGTTGGAGAGTCCAGCTCTAATGCTCAATCATCTCTCATAAATGAGAATCACTCAAGTAAGTATAGGAAAAGAAAATCTAGTCTTTTGATTTTATTTGGAAGGCTAGGTTTGATTCTTATACCTGCTTTATTATTAACCTTGACTTTTCGGTATTTGTGGAATATGAATTTATGGGAGGTTAGACTTTGGAAATATGAAGTCATAATTCTTTTTCTAGTCTCTGGTAGCTTCTTGTCGCATTGTATTATTAGGATTATCATTGTGTTTTTTATTCAAAGAAAATTTCATTTGGAGATCAAACTTGTTTACTATGTATATACTTTGAAGAAAACAATTCAAAATTTTTTGTGGTTGCTACTTTTAGCATGGTCTTTGTGGTTCTATAAGCCTCTTCACAGGGCGGTGATCTGCGTTTTAATGCTATACATGGAGAAAGCTATGTTCAGCAGTTTATTTCTGGCTCCTGCATTATGGATCTTCAAAACCCTAATTGCTGAAATTTTAACCACTCATTTTTACGCGACAGCATATTGCGGTAAGATTGAAGAGTCGATCGTTAATCACTCATTGATTAATATGCTTTCCGGACCACATATGGTCGAACTTCGAAGGGCTAAAGCACAAGAGGATGAAAGACTGGCTGCTCGTAACTTTTCTACCATCATAATTGAAAGGTCAAGGAGTGAGATTGAATATGGTGGTAGACTAACTCTCAATCTTTTGCATAAGCTGAATCCAAAATTTGTGTCGTCTTTGGAAATGAATAGCTTAATGAAAACATTTACCTACAGAGCATTTGATTTGGAAGACGACCATTCCGCATTAGCCTCAACTGAAAAGGAGGCTAAAGCAGCAACCGATCAAATATTCAGAAATCTTGATTTGTGTGGTTCCAGGTCTATAGAAATTGAGGACTTGATGTCTTTCATGATTGAAACTGAAGCTGCTCAAATTGTAAATCACTTTAAAAGAGGATCAAATACTGGAAAAGTAAGTCAAACTTCCTTGAAGGACTGGATTCTGAGTGTGTTCAGGGAGAGAAGAACGCTTAGTTTAAGAATAAATGATACCAAATCACCGGTCCCAAAGTTATACAACTTCTTTAACTTCTTAGTTGTCCTTATTATTTTTGTTATATCGATTTTTATTTTGGAAATGGTCACTATCAAGTCACTTGGCTTTGTTTTTGCGTCACAGTCCGTGTTTGCTTCATTGATATTCGGAATCTCATTGAAAACTTCTTTTGAAGGAATATTTTTTGTTCTTATAATGCATTACTATGATGTAGGAGACAAATGTGTGATTGACGACATTGTAATGACCATGGAGAAGATCAACATACTGACTACCGTGTTTATACGGTTCGATAAAAAACGGATAAGCATGCCCAGCAGTGTGCTTGACAAGAAAAAAATACGTAATTGCAATCGTTGTACTAACATGGAAAAGGCTTTGCAATTCTGTATTCACATAGCAACTCAAAATGATAAAGTTTTCCTCATGAAACAGAGAATAAAAGACTTCATGGAAGGAAAGCTAGAGTATTGGGATCCTTCACCTACTATAAAGTTGTATGATAATGAAATGTTGGACATGGTAAAAGTGGTTGTGTGGCCAACTTTCAGAAAGAACATACAAAACATGGAAGAAAGTTGCATCATGAGGTCTTTGTTGATTGAAGAGTTGATGATGATCTTTAGAGATCTTGAAATTGTTTACTGGATGCCCCTAAACTTCAAAGCTTTTCCTATTACTCACGATTGTCTCCCAGTTAGTTTTTGTTAG 1968 0.3587 MQVKDVVINIDENREMSEIQWENVQTSFVGESSSNAHSSLKDENHSSEISEIKGETVQTSFVGESSSNAQSSLINENHSSKYRKRKSSLLILFGRLGLILIPALLLTLTFRYLWNMNLWEVRLWKYEVIILFLVSGSFLSHCIIRIIIVFFIQRKFHLEIKLVYYVYTLKKTIQNFLWLLLLAWSLWFYKPLHRAVICVLMLYMEKAMFSSLFLAPALWIFKTLIAEILTTHFYATAYCGKIEESIVNHSLINMLSGPHMVELRRAKAQEDERLAARNFSTIIIERSRSEIEYGGRLTLNLLHKLNPKFVSSLEMNSLMKTFTYRAFDLEDDHSALASTEKEAKAATDQIFRNLDLCGSRSIEIEDLMSFMIETEAAQIVNHFKRGSNTGKVSQTSLKDWILSVFRERRTLSLRINDTKSPVPKLYNFFNFLVVLIIFVISIFILEMVTIKSLGFVFASQSVFASLIFGISLKTSFEGIFFVLIMHYYDVGDKCVIDDIVMTMEKINILTTVFIRFDKKRISMPSSVLDKKKIRNCNRCTNMEKALQFCIHIATQNDKVFLMKQRIKDFMEGKLEYWDPSPTIKLYDNEMLDMVKVVVWPTFRKNIQNMEESCIMRSLLIEELMMIFRDLEIVYWMPLNFKAFPITHDCLPVSFC 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi185g00005 655 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 35 638 IPR016688 -
Vivi185g00005 655 Pfam Mechanosensitive ion channel 431 630 IPR006685 GO:0016020|GO:0055085
Vivi185g00005 655 SUPERFAMILY Sm-like ribonucleoproteins 475 536 IPR010920 -
Vivi185g00005 655 ProSiteProfiles EF-hand calcium-binding domain profile. 342 377 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi185g00005 81 644 Mechanosensitive Ion Channel Family AT2G17000 37.686 1.63e-114 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi185g00005 K22048 - gmx:102665658 402.519