Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1852g00008 ATGACGAGTTTTCTGATTGATTACACGAAGAAAAATTCGGAAAAATCGTTAGACAGAGCGCTGAAAGAACTACGTTATATATGTTGTTTCACTTGCATTGCTAAGGAATTTGAAGAAGAAAAAGCTTGGTTGGAAGCAGAAAGGACAGCTGTTGGGCAACGTGTTAAAGTTGCAAAACGAAGAGGAGATGATGTTCAAGCCATTGCTATTTTTTGGGAAGAAGAAGCTGATAAGATCATTCAAGAAGACACCAAAACAAAACAAAAATGCTTTTTTGGATTATGTCCTAATTGCATATGGCGATACAGAAGGGGAAAGGAATTGGCAAATAAGAAGGACCAAATAAAAAAACTTATGAAAACCGGAAAGGAACTTACAATTGGACTCCCTGCTCCTCTTCTAGATGTTGAACGATATTCATCCCGACACTATATTTCTTTTAAAAGTAGAGAATCAAAATGTAAAGAGCTTTTGGATGCACTAAAAGATGACAACAATTATATAGTCGGTTTGCAAGGGATGGGCGGCACTGGAAAGACTACATTGGCCAAAGAAGTGGGAAAGAAACTTAAGCAATCCAAACAATTTACATACATTATTCTTACTACAGTGTCATTTTCTCCAAATATTAAAAAGATTCAAGATGATATTGCTGGACCTTTGGGATTGACATTTGATGGCTGTAGTGAATCAGACAGACCTGTAAAACTACGGAAAAGATTAACCAATGGTGAAAAGATTCTTCTAATATTGGATGATGTTTGGGAAAATATTGATTTTGAAGCAATAGGGATTCCATATTCAGACATTCATAAAGGTTGTAGAGTTCTTGCAACCTCACGTTGTAAACAAGTATTCAACACAATGAATTGTGTTAAGAGAATTGAACTGGGCCTTTTGTCAGAAGAAGATGCATGGATCATGTTTCAAAAATATGCCCATACGAGTAATGCTTGCCCAAAAAAAGTGATTGATATTGGACGTGAAATTGTAAAGGAGTGTAAACAATTACCAGCCGCAATTGCAATTATCGGCAGTAGTTTAAGAGGCCAAGATCAACGAGTGCATGAGTGGGATATGAAATTAAAATCCTTGAAGAAGCATGTATCCTATCACGGGGTTGATGATGATATGGTTGAACTTTATGTATGGTTGAAGTTTAGCTATGATTATATGAAAGATGAAAAAGCCAAGGGATTGTTCCTCTTATGTTTTGTATTTGGAGAAGATGAAGAAATTCCTATTGAAGTTCTAACCAGAATTTTCATAGGAGCGGGGTATTTTGAGGAAGATTATAACACCTACAAAGGGGCTCGTGACCATGCAGTTGTAGCCAAAAATAAACTGCTAGATTATTATTTGTTGTTTGGGGTCGGCGAAAAACATGTAAAAATGCATGGTTTAGTTCGTGATATGGCTCAATGGATAAAAGGCAAGGAGATTCAAAAGTCTTTGGTTGAAAGGAAAGTAAATATTCAATATTTACCAGGTGAAGGGAAGGACAGGAATTTGTTATCCGGTAAGTTTGGTGATTCCAAACTAGAGATTCTATTTGTCAACGTGGATAGAGAAGAAGAACGCAAATGTACGGAAGCTCAAAATTCTTTCTTTGAAAATATGACCCAGCTTCGAGTTTTGTGGTTTTTAGGCAATGACTTTACACGTCTCTCATTACCATATTCAATTCAGTCATTGACAAATATTCGTTCTATATTGGCTAATAGTGTGGATTTAGGAAACATCTCTGTTTTAGGAGAACTGCAAAGCCTTGAAACTCTTGATTTAGTTTGTTGCACAATCAATGAACTTCCAAAAGATATTGCAAAACTAAAGAAATTTAAATTGTTGAACCTGGAGAATTGTGGAATTAGAATGGATAACCCATTTGAAGTTATTAAAAGATGCTCATCACTTGAAGAGTTGTATTTCATAGATAGTTTTAATGGTTTTTGTGGAGATATAACATTACCTCAGTTACAAAGATATCACATCTGTAAAGGGGGGGCTGTAATGGATGATTCTCTGACAAAATATGTGGTTTTTCCTACAAGTGATGATGCATATTGGTTTTCAAAACAAACACTGAAATTTTGTATGCAAACAGCAGAGGTTCTTCGACTAAATGGAATTAAGGGTAGGTGGAGAAATCTCATGCCTGAGATTCTTCCTATAAATCTAGGTAATGATGATCTCGTTGAGCTTTGTTTGAGTTATATTTCACAATTACAATACCTTGTTGACACTATTGGTTATCAAATGCCAAATGTCCTGTCCAATTTGGTTGTACTAAAACTGGATAGAATGGAAAATTTGGAAGGACTATTCAATGGTGCTCTTTCCTTTGACTGTTTTAAGAATTTAAAGAAGGTGTCAATCAAGGACTGTAAACATCTGCGAAGCTTGTTTAAATGCAAGCTAAATCTCTCTGGTCTAAAGGTTCTCGAATTGGAGGGTTGCCCAATGTTAGTTTCCCTATTTTCTCAAGTGTCGACTTTTAGAAGCCTGGTGCTACTAGAGACATTGAAAATAGCTCATTGCGAAAGACTGGAGAACATTAGAGAGGAGGAATCACAAAGCAAAATAAATGACAGAGATAATAGTAACAAATGGCATGGCTCAATGTTTCCAGAGCTAAAAGTCCTTGATATTGAAGGATGTCCCCTATTAGAGTCTATGTTTCCTTTTCTCGTTGTTCAAGATCTTCCAGTACTACAAACTCTTAAAATTAGAAGATGTAATGGGTTGAGATACATATTTGGCAAATACCAACATGTGGAATTCCATTCTCTAAACCAATTGGAGCTCTGCCATTTACCAAAATTCATTGATATGTTTTGTGAATCTAAGCATCCCATATCATCGTCTGTGAAGGGGTCATTGGCTGATGTTGATCAACCACAGGACAACTCAGTGGCACTGGCATCAGAATCAAATTCATATCGCCTTAATATATGGGAGCGTGCTCAATGTCTTCATATACAATCAAAGATCCTTTACAATATTAAAAACATTGAACTATCTCAGTTCTCCAAGATAAAATCGGTATTTATCCTATCCATTGTTCCAAAACTGTCGTTGGAAAGTTTGACAATCAGGAACTGTGATGAATTGGAGCACATAATAGACTTTGGAGATTATGATACTAGCAGCAATAATTGGGGAAGTATCTTCCCAAATTTGAAAGAGCTCAACATTGAAGGTTGCCCGCAATTGAAATACATACTTGGAAGCGACACTCTCGATCAAGAAAACGACATTAAGATTCTGCTTCATCTTCCGAAATTGGAATTTCTAAGTCTTCGCAATCTGCACAGTTTAGTCGCGACGTGTCCTAAAAAATATCATACAACATTTCATCCTTCGGCAAAACTTGAACTAATAGAATGTCCTCTGGCTACTATCAAATCTATTGGTAATTTCATAACGCACCCCGTGTCAGAATCGCTCGACAGTATAATCATAAAGGAATATGGTGATGACCAAAGAGCCACCATACCTTCATGTTCAATTTCCACAAAAGAGCCACTTGCTGGGAAATTTGAAGGTTCTCTAAACGATGATGCTTTCATGGAAGTTGAAGCAACATCTGGATATGAAATCATCATTGTGTCAGACGAGTTTGAAATCATGGAGACAAAAAAGAAACAACCAACAAAGAGAAAGCAAGAATTTGTTGCAAACGTACCTGGATTAGTGATGCCTTTAGCAGCAAATTCAAAAGGAATCAAGTTAATAACATCGCCAACTCATCATTCAGAACAAAATATTTCAACGTCAGTGCCATTATTTAATTATGAGCATAAATCATCTTCACATGAGGAATATTGTCTTGGCCAAATAGGCATACCCGCCTTTTCAATTTCCACTACAGAGCTCCTTACCATTGAAGATGTTGATCGTGGAGAATCACACGAAACAACTAAGCCTAATAATCAAGTTTCTCTAAACGACGACCCTTTCATGAAAGTAAGCTCAAGTACTAAGAAAAAGATTCCTAAGGATGATGATAAAGTTAGAGTTTCAAAATCTAGACCTTCTACTAGCATCATATCACCTATTGCACTTGAGTTTTGTTCAACACTTTCTAAAGGGGACACTTCTCAAATAGTAGAAGATGCATTGAAATTCTTTCCAAATGCATAG 4143 0.3625 MTSFLIDYTKKNSEKSLDRALKELRYICCFTCIAKEFEEEKAWLEAERTAVGQRVKVAKRRGDDVQAIAIFWEEEADKIIQEDTKTKQKCFFGLCPNCIWRYRRGKELANKKDQIKKLMKTGKELTIGLPAPLLDVERYSSRHYISFKSRESKCKELLDALKDDNNYIVGLQGMGGTGKTTLAKEVGKKLKQSKQFTYIILTTVSFSPNIKKIQDDIAGPLGLTFDGCSESDRPVKLRKRLTNGEKILLILDDVWENIDFEAIGIPYSDIHKGCRVLATSRCKQVFNTMNCVKRIELGLLSEEDAWIMFQKYAHTSNACPKKVIDIGREIVKECKQLPAAIAIIGSSLRGQDQRVHEWDMKLKSLKKHVSYHGVDDDMVELYVWLKFSYDYMKDEKAKGLFLLCFVFGEDEEIPIEVLTRIFIGAGYFEEDYNTYKGARDHAVVAKNKLLDYYLLFGVGEKHVKMHGLVRDMAQWIKGKEIQKSLVERKVNIQYLPGEGKDRNLLSGKFGDSKLEILFVNVDREEERKCTEAQNSFFENMTQLRVLWFLGNDFTRLSLPYSIQSLTNIRSILANSVDLGNISVLGELQSLETLDLVCCTINELPKDIAKLKKFKLLNLENCGIRMDNPFEVIKRCSSLEELYFIDSFNGFCGDITLPQLQRYHICKGGAVMDDSLTKYVVFPTSDDAYWFSKQTLKFCMQTAEVLRLNGIKGRWRNLMPEILPINLGNDDLVELCLSYISQLQYLVDTIGYQMPNVLSNLVVLKLDRMENLEGLFNGALSFDCFKNLKKVSIKDCKHLRSLFKCKLNLSGLKVLELEGCPMLVSLFSQVSTFRSLVLLETLKIAHCERLENIREEESQSKINDRDNSNKWHGSMFPELKVLDIEGCPLLESMFPFLVVQDLPVLQTLKIRRCNGLRYIFGKYQHVEFHSLNQLELCHLPKFIDMFCESKHPISSSVKGSLADVDQPQDNSVALASESNSYRLNIWERAQCLHIQSKILYNIKNIELSQFSKIKSVFILSIVPKLSLESLTIRNCDELEHIIDFGDYDTSSNNWGSIFPNLKELNIEGCPQLKYILGSDTLDQENDIKILLHLPKLEFLSLRNLHSLVATCPKKYHTTFHPSAKLELIECPLATIKSIGNFITHPVSESLDSIIIKEYGDDQRATIPSCSISTKEPLAGKFEGSLNDDAFMEVEATSGYEIIIVSDEFEIMETKKKQPTKRKQEFVANVPGLVMPLAANSKGIKLITSPTHHSEQNISTSVPLFNYEHKSSSHEEYCLGQIGIPAFSISTTELLTIEDVDRGESHETTKPNNQVSLNDDPFMKVSSSTKKKIPKDDDKVRVSKSRPSTSIISPIALEFCSTLSKGDTSQIVEDALKFFPNA 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1852g00008 1380 PRINTS Disease resistance protein signature 806 822 - -
Vivi1852g00008 1380 PRINTS Disease resistance protein signature 241 255 - -
Vivi1852g00008 1380 PRINTS Disease resistance protein signature 334 348 - -
Vivi1852g00008 1380 PRINTS Disease resistance protein signature 168 183 - -
Vivi1852g00008 1380 SUPERFAMILY L domain-like 464 942 - -
Vivi1852g00008 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 404 IPR027417 -
Vivi1852g00008 1380 MobiDBLite consensus disorder prediction 1299 1344 - -
Vivi1852g00008 1380 Pfam NB-ARC domain 154 390 IPR002182 GO:0043531
Vivi1852g00008 1380 Gene3D - 136 296 IPR027417 -
Vivi1852g00008 1380 MobiDBLite consensus disorder prediction 1323 1342 - -
Vivi1852g00008 1380 Gene3D Ribonuclease Inhibitor 697 864 IPR032675 -
Vivi1852g00008 1380 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 904 1107 - -
Vivi1852g00008 1380 FunFam Probable disease resistance protein At1g61300 135 294 - -
Vivi1852g00008 1380 Gene3D - 299 392 IPR042197 -
Vivi1852g00008 1380 MobiDBLite consensus disorder prediction 1307 1322 - -
Vivi1852g00008 1380 Gene3D Ribonuclease Inhibitor 865 1117 IPR032675 -
Vivi1852g00008 1380 SUPERFAMILY L domain-like 875 1139 - -
Vivi1852g00008 1380 Gene3D Ribonuclease Inhibitor 523 667 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1852g00008 169 621 WRKY Transcription Factor Family AT5G45050 23.384 1.98e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1852g00008 - - vvo:131643003 2756.47