Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1852g00007 ATGCCTATTCAAAAGGACACCAAACCAATATTTCTAACAAGTTGTTTTGGATTTTGTACTAAGTACCGGAGGATATATGAAAGGGATACGGAATTTAAAAGACTAATAAGATTCGTAGATGAAAGGGAAAAGGAGATTAAAAGAATAATGAAACATAAAGTTAAATCTGGAAATATAGGAAGTTATCCTCACAGTCTTCCAGTTATCCGATACTCTAATGTTACAAGTTACATTTCCTTTAAAAGCAGGGAGTTTGAATACAAAAATCTGTTGGATGCACTAAGAGATGAAAATAACTTTATAACGGTATTGCAAGGGATGACTGGTATTGGAAAAACTTCAATGGCCCTAGAAGTGATAAGAGAATTAGAGAAATTTGAGCGATTCACCCATTTCATTTATGTGACCGTTTCATTCACTCCTAATATAAAAGAGATTAAAGATGCTATTCTTGAATCTTTTGGCTTGAATTGGAAGGACTATAGTGAATCAGACAAAACCATAAAAATATTGAATAGATTAACAAATGGAGAGAAAATTCTTCTGCTAATGGATGACATGTGGGGTCAATTCCCACTTGATTTTGAAGAAATCGGGATTCCAAATTCAGACAATCACAAAGGTTGCAGAGTTCTTGTAACCTCTCGCAGTAAGCAAATATTCAACACAATGAGTTGTGTCAAGAGAATTGAACTCGACCTTTTATCCGAAGAAGATGCATGGATCATGTTTCAAAAATATTCCTGCATGGGTAATAGATGCCCAAGAGTAGTGATTAGCATTGGACGTGAAATTGCAAAGGAATGTAAACAATTACCAGCCGCAATTGCAATTATCGGTAGTAGTTTAAGAGGCCATCGAGTAATGCAAGAGTGGGCTATGAAATTACGGTCATTGAAGAAGCATGTATCCTATCACGGGGTTGATGATGATATGGTTGAACTTTATGAATGGTTGAAGGTTAGCTATGATTATATAAAAGGCGAAGAAGCCAAGGAATTGTTCCTCTTATTTTCTGTATTAGGAGAAAATGAAGAAATTTCTGTTGAAGTTCTAACCAGATTTTCCATAGGAGCGGGGCTTTTTGAGGAAGATTATCGGGCTCGTGAAAAAGTGGTTGTAGCCAAAAATAAACTGCTAGATTCTTATTTGTTATTGGGGGTCGGCGAAAAAAATGTAAAAATGCATGGTTTGGTTCGTGATATGGCTCAATGGATAAAAGAAAAAGAGATTCAAAAGTCTTTGGTTGAAAGGAAAGTAAATATTCAATATTTATCATGTGAAGGGAAGGATAAGGGTTTGTTTTCCAGTAAGTTTGATGATTCCAAACTTGAGATTCTAATTGTCAAAGTGGACAGTGATAAAGACCACAAATGTATGGAAGTTCCAACTTCTTTCTTTGAAAATATGGCCAAGCTTCGAGTTTTGTGTTTTTCAGGAAATGATGATTATCCACTACTATCATTACCAAATTCAATTCAGTCATTGACAAATATTCGATCTATATTGATTAAGACTGTGGATTTAGGTGACATCTCTATCATGGGAAAACTGCAAAGTCTTGAGACTCTTGAATTGATTCAATGCACAATCAATGAACTTCCAAAAGAAATTGCAAATCTAGAGAAATTTAAATTGTTGAACTTGGAGCACTGTGTAATTAGCTCGGGTGACCCATTTGAAGTTATTAAAAGATGCTCATCACTTGAAGGATTGTATTTCATAGATAGTTTTAATTGTTTCTGTGGAGAAATAACATTACCTCAATTGCGAAGATATCAAATCTGTAAAGGGTGGGCTGTATGGAATAATTGGCTATCGAAATGTGTGGTTTTTCCTATAAATGGTGATGCATATAGGTTTTCAAAAGAAACATTCAACTATTGTATGCAAACAGCAGAGGTTCTTCTACTAAACGGAATTAAGGGGAAGTGGAGAAATCTCATGCCTGAGATTGTTCCTATAAATCTAGGTATGAATGATCTTGTTGAGCTTTGCTTGAGTTGTGTTTCGCAAATACAGCTCCTCGTTGACACGATTGGTTATCAAATGCCAAATGTCTTATCCAAGTTGGTAGTACTAAAACTGGATAGGATAGAAAATTTGAAAGAACTATTTAATGGTGCTCTATCCGTTGATTGTTTGACGAATTTAGAGAAGGTGTCAATCAAGGACTGTAAACATCTGCGAAGTTTGTTTAAATGCAAGCTAAATCTCTTCAGTCTAAAGGTCATCGAACTGCAGAATTGCCCGATGTTAGTTTCCTTATTTTCTCAACGGCTGACTTCTGGAAGCCTGGTGCTACTAGAGACATTGAAAATAGCTCATTGCGAAAGACTGAAAAACATAATAGTAGATGAAAAGAGAGAGGAGGAATCAAGCATGGAAATGGATGACGAAGATAATAGTAACGAATATCATGGATTAATGTTTCCAAAACTAAAAGTGCTTGATATTGAAGGATGTCCTCTATTAGAGTCTATATTTCCTTTTCTATTTGCTCAAGACATTCCAGTAATACAAACTATTAAAATTAAAAGATGCGATGGGTTGAAATACGTATTTGGCGTATACCAACATGTTGAATTCCGTTCACTAAGGCAATTGGAGCTCTGCCATTCACCAAATTTCACTTATATGTTTCGCGAATCTAAGCATCTCATATCTTCATCTGTGAAGGGGTCAACATCTTCCATTCCATTGGTTGATGTTGAGCAGCCGCATGACAATTCATTGGCACTGGAATCCAATTCATATCGCTTTCATATATGGGAACGTACTCAATGTCTTCAAATACAGTCAATGATCCTTTACAATATTCGAAAGATTGAACTGTCTCATATCTCCAAGATAAAATCGGTATTTATCGTATCTGTCGTTCCAAAATTGTTGGTGGAAAGTTTGACAATTAGGAACTGTGATGAATTGAAGCACATAATAGACTTCGGAGATTATGACAGTGGCAGCAATAATTGGGGCAATATCTTCCCAAAATTGGAAGAGCTCTACATTGAAGGTTGCACGCAATTGAAATACATACTTGGACGCGACACTCTTGATCAAGAAAACCACCTTAAGATTCTGCTTCGTCTTCCGAAATTGAAATTTCTAAGTCTTCGCAATCTTTCAAGTTTAGTCGCGATCTGTCCCAAAAAATATCGTATAAAATTCCCTCCTTCGGCAAAACTTGAACTAATAGAATGTCCTCTGGCTACTATCAAATCTATTGGTAATTTCAAAATGCACCCGGTGTCAGAATCGCTCGACAGTACAATCATAAAGGAATATGGTGATGACCAAATAGCCATACCTTCGTCTTCAAGTTCCACAAAAGAGCCACATGCTGGGAAAGTTGAAGGTTCAGAGGAAACAAATCAGAATAAAAATCTAGGTTCTCTAGATGATGATGCTTTCATTAAAGTAAGCTCAACTACTAACCAACAGTTTCCTAAAGGTTTTCCAAATGGGACTGAAGTTGAAGCAACATCTGGATATGAAATCAACATTGATCAGTCAAACGAGTTTGAAATCATGGAGACAAAAAAGAAACAACCAACAAAGGGAAAGCAAGAATTTGTTGTAAACGTTCCAACATTAAAGAATCAATTTGACATGTAA 3618 0.3579 MPIQKDTKPIFLTSCFGFCTKYRRIYERDTEFKRLIRFVDEREKEIKRIMKHKVKSGNIGSYPHSLPVIRYSNVTSYISFKSREFEYKNLLDALRDENNFITVLQGMTGIGKTSMALEVIRELEKFERFTHFIYVTVSFTPNIKEIKDAILESFGLNWKDYSESDKTIKILNRLTNGEKILLLMDDMWGQFPLDFEEIGIPNSDNHKGCRVLVTSRSKQIFNTMSCVKRIELDLLSEEDAWIMFQKYSCMGNRCPRVVISIGREIAKECKQLPAAIAIIGSSLRGHRVMQEWAMKLRSLKKHVSYHGVDDDMVELYEWLKVSYDYIKGEEAKELFLLFSVLGENEEISVEVLTRFSIGAGLFEEDYRAREKVVVAKNKLLDSYLLLGVGEKNVKMHGLVRDMAQWIKEKEIQKSLVERKVNIQYLSCEGKDKGLFSSKFDDSKLEILIVKVDSDKDHKCMEVPTSFFENMAKLRVLCFSGNDDYPLLSLPNSIQSLTNIRSILIKTVDLGDISIMGKLQSLETLELIQCTINELPKEIANLEKFKLLNLEHCVISSGDPFEVIKRCSSLEGLYFIDSFNCFCGEITLPQLRRYQICKGWAVWNNWLSKCVVFPINGDAYRFSKETFNYCMQTAEVLLLNGIKGKWRNLMPEIVPINLGMNDLVELCLSCVSQIQLLVDTIGYQMPNVLSKLVVLKLDRIENLKELFNGALSVDCLTNLEKVSIKDCKHLRSLFKCKLNLFSLKVIELQNCPMLVSLFSQRLTSGSLVLLETLKIAHCERLKNIIVDEKREEESSMEMDDEDNSNEYHGLMFPKLKVLDIEGCPLLESIFPFLFAQDIPVIQTIKIKRCDGLKYVFGVYQHVEFRSLRQLELCHSPNFTYMFRESKHLISSSVKGSTSSIPLVDVEQPHDNSLALESNSYRFHIWERTQCLQIQSMILYNIRKIELSHISKIKSVFIVSVVPKLLVESLTIRNCDELKHIIDFGDYDSGSNNWGNIFPKLEELYIEGCTQLKYILGRDTLDQENHLKILLRLPKLKFLSLRNLSSLVAICPKKYRIKFPPSAKLELIECPLATIKSIGNFKMHPVSESLDSTIIKEYGDDQIAIPSSSSSTKEPHAGKVEGSEETNQNKNLGSLDDDAFIKVSSTTNQQFPKGFPNGTEVEATSGYEINIDQSNEFEIMETKKKQPTKGKQEFVVNVPTLKNQFDM 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1852g00007 1205 Gene3D Ribonuclease Inhibitor 399 609 IPR032675 -
Vivi1852g00007 1205 SUPERFAMILY L domain-like 394 875 - -
Vivi1852g00007 1205 Gene3D - 234 326 IPR042197 -
Vivi1852g00007 1205 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 841 1068 - -
Vivi1852g00007 1205 Gene3D Ribonuclease Inhibitor 802 1089 IPR032675 -
Vivi1852g00007 1205 FunFam Probable disease resistance protein At1g61300 72 229 - -
Vivi1852g00007 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 337 IPR027417 -
Vivi1852g00007 1205 Gene3D Ribonuclease Inhibitor 634 799 IPR032675 -
Vivi1852g00007 1205 Gene3D - 68 231 IPR027417 -
Vivi1852g00007 1205 Pfam NB-ARC domain 91 324 IPR002182 GO:0043531
Vivi1852g00007 1205 PRINTS Disease resistance protein signature 737 753 - -
Vivi1852g00007 1205 PRINTS Disease resistance protein signature 101 116 - -
Vivi1852g00007 1205 PRINTS Disease resistance protein signature 174 188 - -
Vivi1852g00007 1205 PRINTS Disease resistance protein signature 269 283 - -
Vivi1852g00007 1205 MobiDBLite consensus disorder prediction 1102 1133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1852g00007 106 503 WRKY Transcription Factor Family AT5G45050 22.356 2.06e-08 57.0