Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1852g00006 ATGACGAGTTTTCTGATTGATTACACGAAGCAAAATGTAGAGAAATTGTTAAATGAAGCGCTGAAAGAATTACGTTATATATGTTGCTTCACTTGCATTGCTAATGATTTTGAAGAAGAAAAAGTCTGGTTGGAAGCAGAAAGGACATCTGTTGGGCAGCGTGTTAAGGTTGCAAAAAGAAGAGGAGAAGATGTTCAAGCTAATGCTCTTTTTTGGGAAGAAGAAGCTGACAAGCTCATTCGAGAAGACACCAAAACAAAACAAAAATGTTTTTTTGGATTATGTCCTCATTGCTTATGGCGATACAAAAGGGGAAAGGAACTGGAAAATAAGAAAGACCAAATAAAAAAGTTTATGGAAACTGGAAAGGAACTTGCAATCGGCCTCCCTGCTACTCTTCCAGATGTTGAACGTTATTCATCCCGACACTATATCTCTTTTAAAAGTAGAGAATCCAAATATAAAGAGCTTCTGGATGCACTGGAAGATGACACCAATTATATAATCGGGTTGCAAGGGATGGGGGGTACAGGAAAAACTACATTGGCCAAAGAAGTGGGTAAGAAACTTAAGCAATCCAAACAATTTACGTGCATTATTGATACAACAGTATCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGAATGAAATTTGATGACTGTAGTGAATCAGATAGACCCAAAAAACTATGGAAAAGATTAACTAATGGTGAAAAGATTCTTCTAATATTGGATGATGTTTGGGGAGATATTGATTTTGAAGAAATAGGGATTCCATATAGTGACAATCACAAAGGTTGTCGAGTTCTTGTAACCACGCGCAATGTGTTGGTATGCAACAGATTAGGATGCAGTAAGACAATCAGATTGGAGCTCTTATCTGAAGAAGATGCGTGGGAAATGTTCAAACATCATGCTGGTCTTACTGAAATTTCAACTCAAAGTTTGCTCGACAAGGGTCGTAAAATTGCAAATGAGTGCAAAAGATTACCAATTGCAATAGCGGCGATCGCTAGTAGTTTGAAAGGAAAACAACATCGGGAAGAATGGGACATGGCCTTAAAATCCTTGCAAAAACATGTGTCAATGCACGATGATGTTGTTGATGATGATGATTTGTTTAAAATATATGAGTGCTTGAAATTTAGCTATGATAATATGAATGATGGAAAGGCCAAAAGACTATTCCTTTTGTGTTCTGTATTTCGAGAAGATGAAGAAATTTCTATTGAAAGATTAATAAGACTGGGCATAGGAGCTGGCCTTTTTGGGGAAAATTATGGCAACTACGAAGATGCTCGAAGTCAAGTAGTTATATCCAAAAATAAACTCATAGATTCTTGTTTATTGTTGGAGGTAGATCAAAAGAGAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAAAGGATTGCGATTAAAGAGATCCAAACAATAAAGTTGTATGATAAAAATCAAAAGGCAATGGTTGAAAGGGAGAAGAATGTTAAATATTTGTTATGGGAAGGAAAACTAAAGAGCGTGCTTTCATGCAAGCTTGATAGTTCAAAGCTCCAAATTCTAATTGTTATCATGTATAAGGACGGTGATTTCCATAAAGAGAAAACCGAAGTCCCAGACTCATTTTTTGAAAATATTAGCGGTCTTCGATGTTTTCACTTATGTAGTGATTTTTATGGAGCAACTCTATCATTACCTCCATCAATTCAATCTTTGAAGAATATTCGATCTCTTCTTTTTAAGTGTGTTGATTTGGGTGATATCTCTATTTTCGGAAGTCTGCAAAGTCTTGAGACACTTGATTTGGATAATTGTAAAATCAATGAATTGCCAAATGAACTTGCAAAACTACACAATCTTAGATTGTTGTACTTGAAAAGTTGTGATATTATAAGGAATAATCCATTTGAAGTGATTGAAGAATGCTCCTCACTCGAAGAGTTGTATTTCATACACAGTTTTAATGATTGTTGCCAAGAAATAACCTTTCCAATGCTACAAAGATTTATAGTGGATGATGATTGGAGGTTTGTGGATGATTCACTATCAAAATGCTTGTCTATTTTACATCAAGAAAATAGAAATTTATTGTCTGAAAAAAAACTCAAGGATTGTATGCAAGCAGTAGAGGTTCTTAGACTAAGAAAACTTCGGTGGGGATGGATAAATATCATACCTGAGATTGTTTCTATGGATAATGGTATGAATGATCTCGTCGAGCTTAGATTGAGTTACATTTCACAACTTAAGTGTCTCATTGACACTAAGCGTGGAAATTCTCAAGCAACATCTGTCTTCTCCAAGTTGGTTGTATTACAATTGGAAGAAATGGAAAGTTTGGAAGAATTGTGCAATGGTCCTCTTTCTTTTGATTCATTCAAGAATTTAGAGAAGCTGACCATCAAGTATTGCAATCAGTTGCAAAGCTTATTTATGTGCAACTTAAATCTCTGCAATCTAAAGAGCTTGTTATTGATAGGATGTCCGATGTTGTTCTCTCTATTTCAACTTACTACTTCTCGTAGCCTAGTGTCATTGGAGGAATTGAAAATACTTTGGTGCAGGCATCTTGAATACATAATAACAGACGAAAGAAAAGAGAAAGAATCGAGAGGAGAAATAGTTGCTGATGATGAAAATGATAGCAAGAGGAGTCACAAATCAATGTTTCCAAAACTTAAAGATCTTAAAATTGATATGTGTTGTGGGTTAGAATTTATACTTCCATTTCTATCTATTCAGGATCTTCCGTCACTTGAATCTTTTACAATAAGTTATTGTGAGAAGCTGCAATACATATTTGGCCAATATGTACAACTTGGTTCTCTAAAACAAATGATTCTTCATTCTTTGCCCAATTTAATAAATATTTTTCCAAAATGTCATCTTACCACATCTTCTTCCATTTCTAGAGATGCCTCCAAGCCAGAAAAACAATCAGAACCTATGAAACGCACTGTCTTTTTATGGAGAGATATATGTTGCTTTGGTAAAAAAAACTGGCACAAATCCACGAGTTCTACGAGTACTGAAACCCCATTGGTTTCTGAAGATAAACAGCCGGATTGCTTAATAGCTTCGGAATCCGATTCCAATTCCTTCAAGATATGGGAACGTGTTCAATGTCTTTTGACACAATCACTCTTCATGTGGAATATTAAAGAGATTGAATTAGTTAATATTTTAAAGATAGAATCAATATTTATCCTATCTATTGCTCCAAGAATATTGTTGGAAACTTTGACAATTAGGTACTGTAATAATTTGAAGCACGTAATAATAGAAACCAGAGATTATGAAAGTGGTGGCAACAACTGGCACAATATCTTCCCAAAATTAAAAGAGATCAGGGTCGAAGGATGCATGAAGTTAGAATACATATTTGGACATTACTTGGAGGCTCATCAAAACCATAATGAGATTCACCTTTATCTTCCAGCTTTGGAACGTCTCGTTCTTAGGAATCTGCCAAAGTTAGTCACCACGTGTTCCAAACATTATCGCACAACATATCCACTTTTGGAATATCTTGTAGTTGAGAAGTGCTCGCAGTTTGCTATCAAATCTATTGGCGATCTCACAATTCCTTTGGTTTCAAAATCTCTCGACACTACAATCAAGAAGCAGGAATTGAATGGGAACATGGATCATTTTCTTGCTTTAAAAAGTCTCAAGGTGTATGATTGCAAAGTAGAAAATATATATTTTCTGAATGAAGTACATGAACAACAAATGAACTTAGGTTTGCAGTACATTGAGTTGCATGATCTTCCTACGACAACTTGTTTGTTGGTTGGTCCCAAAAATTCATTTTCTCTCAATCACCTTACACGGATAAAAATCTTCCGATGCGAAAAATTGGAAATTGTGTTTTCCACTTCTCTATTAAGATGCCTACCACAATTGCTTTTTCTGAGAATACAAGAATGCAAAGAGTTGAAGCATATTATTAAAGATGATTTGAAGAATGAAAATTCCACAAATTTTCAATCTACAAACACATACTTCCCAAAGCTAGAAATACTTGGTGTGGTAAACTGCAACAAGCTCAAATACGTCTTTCAGACTTCCATATGCAAAGTGCTTCCAAATCTAAAGGCTCTGATGATAAGAGAATCATATGAGCTAGAAGAAATATTCAAAAGTGAAGGTGATGATCAAAAACTTGAGATTCCAAATCTGAATGTTGTAGCATTCATCAATCTGCCAAACCTCTGCAAAGATCAAGAAGTGCATTTTGAGGGTGTAAATTATCGTCTTGTACGTAATTGTCATAAACTCTCTCTGACTTCAGCATCAAAATCCGACCGGATTGGTAACATTATTTATTTTGTTGACAAAATAGATACTGAAATCTCTATGGAATTGTCGATTCTATTGCAACCATTAGAAGAAGTGTACCAAAGCCAGTACACCTGTAATCAAAATCCAAGTTCAGAAATCACTCAAGAATTTGCAGCTGGGGTTGAAGCGGAAACAACACCAGGACACATATTGACTTCTTCACAGGTGTTGATGAATGAACAATCAATGGATCAACAACTTTTGATGAACCAACAACACTCACTTCGAGAAACTGATGATACTACCATCAAACCACAGAAACAAAGAATGAGCCACCTATACAATTAG 4653 0.3533 MTSFLIDYTKQNVEKLLNEALKELRYICCFTCIANDFEEEKVWLEAERTSVGQRVKVAKRRGEDVQANALFWEEEADKLIREDTKTKQKCFFGLCPHCLWRYKRGKELENKKDQIKKFMETGKELAIGLPATLPDVERYSSRHYISFKSRESKYKELLDALEDDTNYIIGLQGMGGTGKTTLAKEVGKKLKQSKQFTCIIDTTVSFSPDIKKIQDDIAGPLGMKFDDCSESDRPKKLWKRLTNGEKILLILDDVWGDIDFEEIGIPYSDNHKGCRVLVTTRNVLVCNRLGCSKTIRLELLSEEDAWEMFKHHAGLTEISTQSLLDKGRKIANECKRLPIAIAAIASSLKGKQHREEWDMALKSLQKHVSMHDDVVDDDDLFKIYECLKFSYDNMNDGKAKRLFLLCSVFREDEEISIERLIRLGIGAGLFGENYGNYEDARSQVVISKNKLIDSCLLLEVDQKRVKMHDLVRDAAQRIAIKEIQTIKLYDKNQKAMVEREKNVKYLLWEGKLKSVLSCKLDSSKLQILIVIMYKDGDFHKEKTEVPDSFFENISGLRCFHLCSDFYGATLSLPPSIQSLKNIRSLLFKCVDLGDISIFGSLQSLETLDLDNCKINELPNELAKLHNLRLLYLKSCDIIRNNPFEVIEECSSLEELYFIHSFNDCCQEITFPMLQRFIVDDDWRFVDDSLSKCLSILHQENRNLLSEKKLKDCMQAVEVLRLRKLRWGWINIIPEIVSMDNGMNDLVELRLSYISQLKCLIDTKRGNSQATSVFSKLVVLQLEEMESLEELCNGPLSFDSFKNLEKLTIKYCNQLQSLFMCNLNLCNLKSLLLIGCPMLFSLFQLTTSRSLVSLEELKILWCRHLEYIITDERKEKESRGEIVADDENDSKRSHKSMFPKLKDLKIDMCCGLEFILPFLSIQDLPSLESFTISYCEKLQYIFGQYVQLGSLKQMILHSLPNLINIFPKCHLTTSSSISRDASKPEKQSEPMKRTVFLWRDICCFGKKNWHKSTSSTSTETPLVSEDKQPDCLIASESDSNSFKIWERVQCLLTQSLFMWNIKEIELVNILKIESIFILSIAPRILLETLTIRYCNNLKHVIIETRDYESGGNNWHNIFPKLKEIRVEGCMKLEYIFGHYLEAHQNHNEIHLYLPALERLVLRNLPKLVTTCSKHYRTTYPLLEYLVVEKCSQFAIKSIGDLTIPLVSKSLDTTIKKQELNGNMDHFLALKSLKVYDCKVENIYFLNEVHEQQMNLGLQYIELHDLPTTTCLLVGPKNSFSLNHLTRIKIFRCEKLEIVFSTSLLRCLPQLLFLRIQECKELKHIIKDDLKNENSTNFQSTNTYFPKLEILGVVNCNKLKYVFQTSICKVLPNLKALMIRESYELEEIFKSEGDDQKLEIPNLNVVAFINLPNLCKDQEVHFEGVNYRLVRNCHKLSLTSASKSDRIGNIIYFVDKIDTEISMELSILLQPLEEVYQSQYTCNQNPSSEITQEFAAGVEAETTPGHILTSSQVLMNEQSMDQQLLMNQQHSLRETDDTTIKPQKQRMSHLYN 1550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1852g00006 1550 PRINTS Disease resistance protein signature 168 183 - -
Vivi1852g00006 1550 PRINTS Disease resistance protein signature 241 255 - -
Vivi1852g00006 1550 PRINTS Disease resistance protein signature 599 615 - -
Vivi1852g00006 1550 PRINTS Disease resistance protein signature 334 348 - -
Vivi1852g00006 1550 SUPERFAMILY L domain-like 543 861 - -
Vivi1852g00006 1550 MobiDBLite consensus disorder prediction 1529 1550 - -
Vivi1852g00006 1550 SUPERFAMILY RNI-like 1225 1384 - -
Vivi1852g00006 1550 Gene3D - 390 478 IPR036388 -
Vivi1852g00006 1550 FunFam Probable disease resistance protein At1g61300 134 294 - -
Vivi1852g00006 1550 ProSiteProfiles Leucine-rich repeat profile. 603 625 IPR001611 GO:0005515
Vivi1852g00006 1550 SUPERFAMILY RNI-like 896 1190 - -
Vivi1852g00006 1550 Gene3D Ribonuclease Inhibitor 1177 1400 IPR032675 -
Vivi1852g00006 1550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 406 IPR027417 -
Vivi1852g00006 1550 Gene3D - 133 295 IPR027417 -
Vivi1852g00006 1550 Gene3D Ribonuclease Inhibitor 538 976 IPR032675 -
Vivi1852g00006 1550 Gene3D - 300 389 IPR042197 -
Vivi1852g00006 1550 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1215 1407 - -
Vivi1852g00006 1550 Pfam NB-ARC domain 155 393 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1852g00006 169 642 WRKY Transcription Factor Family AT5G45050 22.530 2.40e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1852g00006 - - vvo:131662148 3021.49