Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1849g00001 ATGAACACATCATCAATTCCAGATTGTGTTGATAAATGGGTGAACCATATACATGAACAAAGTATGGAACAAAGCCAAGAAAGTATTGACAAAATTGAGCCTCACTTAGGAATGGAGTTTCTATCTGAAGCAGAGGCTTATGAGTTTTATAATAAATATAGTAAAGGATTTGGGTTTGGTATTCGCCGAGAATATTCAAATAAAAGCCGAATAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTGCTCGAGTTATTGACAAAAGACGCAACCCAACGGGAGAACCTAGAGCAGAAACCAGAACAGGATGCCTAGCACGTATGGTTATTTCACTTGATCGGAAGATTGAGAAATATAAAGTTGTTGACTTTGTAGCTCAACATAACCACCCTCTTTTGCCGCAGGAGTATGTTCATATGATTCGCTCTCATCGACACATTTCTGAGGCACAAGCATCACAAATTATCTTGGGAGAAGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATATCCAAGCAATCCGGTGGAATAGAGACAGTTGGTTTTACCAGACAAGACCTGAAGAACTTGCTTAAAACCAAAAGGAAGCAATCTCTAAAATACGGTGAAGTGGGTGCATTGATGAGATATTTCAAACAAGAAAGTGAAAATCCATCATTCTTTTATGATTTTCAAATGGATGTTGAAGAACAAATAACAAATATATTTTGGGCGGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATATCGTCACTTTTGACACCACTTACAAGACAAATAAAGATTGTCGACCGTTGGGAGTATTTGTTGGACTTAATAAGCATAGGCAAACAATCATTTTTGGGGCAGCATTGTTATATGATGAAACAATACCTTCTTTTCAGTGGTTGTTTGAAACATTTCTCAAAGCGATGACCCAAAGAAAGCCTAAAACCATTCTAACAGATCAAGATGCTGCAATGGCTAAGGCTATTTCCTTGGTTATGCCAGAAACTTTTCATGGATTGTGCACTTGGCATATAAGACAAAATGCTTTAAGGCATGTGAATCATTTATATCAGAAGAGTTCAAAATTCGGATTGGATTTTGAAGCATGTATAGATCTACACGAAGAGGAAGGTGACTTTTTGAATGCGTGGAATTCTTTACTTGTTGAACATAATGTGCTGGAAGGTTCATGGTTGCATACAATTTTTCAATCAAAGGAAAAATGGGCATGGACTTATGTTCGAAAAACATTCACTGCAGGTATGAGATCTACTCAATTAAGTGAAAGCTTTAATGCTGATTTGAAAAACCATTTGAAGTCAGATTTAAATTTGGTTCAATTTTTTACTCACTTTAAAAGGGCTGTTAATGGTAAACGGAACAATGAGTCAGAAGCTGAATATGAGTCAATACATAAGTTGCCTAAATTGAAAATGAAGAAGGCTCGTATGCTCATACAAGCCGGAAGTGTTTACACTCCAAGAATTTTTGAGGAATTCCAAGAGGAGTATGAAGAATATCAAGACACTTGTGTAAAGGATTTGAAAGGAGGTTTGTTTGTTGTCACAAATTATGACAATACAAAAGAAAGGATAGTAATGGGAGATCCTATGGAACAAAAAGTTTCTTGTGCTTGTCGTAAATTTGAGACACATGGCATCTTATGTAGTCACGCTTTGAAAGTTCTAGATGTCATGAACATAAAATTAATTCCGGAACAGTATATACTCAAGAGATGGACAAGAGGTGCAAGGTTGAGAAGTAATCAAGATTGGGATGGAAGGCATGTTGAATTAGACATGAAAGCACACTTCATGAAGCGATACAATGAGTTATGTCCTCGAATGATCAAATTGACCAACAGAGCTTCGGAATCACATGAAACTTACACATTTTTGTCCAAAGTCTATGAAGAGTCGAGCAAAATAATTGATGATATGTTAGCAAAAGAATATGTGGATGAAAAATCAAGTGGAATGGTCCATGTATCAATATCAATTGCAAATGATGAGATTGACAACATTGACATCGTTGGTATGGCAAAAGGCATAAAGAAGAAAAATTGTTCTCGTAATAACAAAAAACGAGATAAGTCTTGGGTTGAGAAATTAAATAGAAAGACAAAGAGATACTCACAAAAAAAGAAAATGATCTCTCCAGAAAATTCAGCACAACCGTTACCGCAACAAACTCCAATCCAATCAATTCAAAGTGACAATGGAAATCAACATCAAGCTAACTTTCAAGCGACACAATCAAGTCAGATTGAGAATGAAACTCAACATCAAGCTACTATCCATACAACACAATCAAGTCAAATTGACACATTGGGATTTCACAACTTTTTTTAG 2364 0.3579 MNTSSIPDCVDKWVNHIHEQSMEQSQESIDKIEPHLGMEFLSEAEAYEFYNKYSKGFGFGIRREYSNKSRIDGVLTSRRFTCFKEGARVIDKRRNPTGEPRAETRTGCLARMVISLDRKIEKYKVVDFVAQHNHPLLPQEYVHMIRSHRHISEAQASQIILGEESGLRPKDLHEYISKQSGGIETVGFTRQDLKNLLKTKRKQSLKYGEVGALMRYFKQESENPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDIVTFDTTYKTNKDCRPLGVFVGLNKHRQTIIFGAALLYDETIPSFQWLFETFLKAMTQRKPKTILTDQDAAMAKAISLVMPETFHGLCTWHIRQNALRHVNHLYQKSSKFGLDFEACIDLHEEEGDFLNAWNSLLVEHNVLEGSWLHTIFQSKEKWAWTYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLVQFFTHFKRAVNGKRNNESEAEYESIHKLPKLKMKKARMLIQAGSVYTPRIFEEFQEEYEEYQDTCVKDLKGGLFVVTNYDNTKERIVMGDPMEQKVSCACRKFETHGILCSHALKVLDVMNIKLIPEQYILKRWTRGARLRSNQDWDGRHVELDMKAHFMKRYNELCPRMIKLTNRASESHETYTFLSKVYEESSKIIDDMLAKEYVDEKSSGMVHVSISIANDEIDNIDIVGMAKGIKKKNCSRNNKKRDKSWVEKLNRKTKRYSQKKKMISPENSAQPLPQQTPIQSIQSDNGNQHQANFQATQSSQIENETQHQATIHTTQSSQIDTLGFHNFF 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1849g00001 787 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 646 IPR031052 GO:0006355
Vivi1849g00001 787 MobiDBLite consensus disorder prediction 713 775 - -
Vivi1849g00001 787 ProSiteProfiles Zinc finger SWIM-type profile. 524 571 IPR007527 GO:0008270
Vivi1849g00001 787 Pfam MULE transposase domain 258 352 IPR018289 -
Vivi1849g00001 787 SMART 26again6 546 573 IPR006564 GO:0008270
Vivi1849g00001 787 MobiDBLite consensus disorder prediction 721 775 - -
Vivi1849g00001 787 Pfam FAR1 DNA-binding domain 48 138 IPR004330 -
Vivi1849g00001 787 ProSiteProfiles WRKY domain profile. 84 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1849g00001 MULE 4.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1849g00001 - - tpra:123895462 1179.85