Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1834g00003 ATGGACTTTGATTCTCTTCTCTTTCAAAACCAAAACCAAAACCTTCTATACTTCCCTCAAAATTCCTACTCCAATAATTTCTCTTGGGAATTAGAAAATTTCAATAGTTTCTTTAGTGATGATATCGACTTCAACAACGAATCACATACAAATGAATCATTTTCTTCATCTTTATCATCTGCCGAGTCCAATTCTTTGGTGTCCGTACTAAGCAATGAGTCAATAGAAGTCTCATCCAATACAACTTATACACAACTAATCAAACAAACACAAACTTCATCACTATCACCATCACCACCGCAGATTAAGGAAAGTAATAAAAGGGCGTATAGAGGAGTAAGAACAAGGCCATGGGGAAAATTCGCGGCCGAGATAAGAGATTCAACACGAAAAGGTGTTAGAGTATGGATTGGAACATTCGACACGGCCGAGGCGGCCGCGTTAGCTTATGATCAAGCAGCTTTTTCAACAAGAGGTTCATTGGCAGTGTTGAATTTTCCGGAAGAAGTTGTTAGAGAATCACTTAAAGAAATGAGTAGAAACTCTAAGCCTTTGGAAGAAGGTACTTCACCCGTATTGGCACTCAAGAGGAAACACATCATAAGAAAAAAGTCCAATAAGGTTAGTAAAAAGAAAATCAAAAGTGAAGAACAAATCAAGATTCAAATAGAGACCAAAAATGCTAATATTAATTCACAAAATGTGTTTGTGTTTGAGGATTTGGGTGCTGAATATCTGGAGCAACTATTGAGCTTGACTTCTTAG 765 0.3699 MDFDSLLFQNQNQNLLYFPQNSYSNNFSWELENFNSFFSDDIDFNNESHTNESFSSSLSSAESNSLVSVLSNESIEVSSNTTYTQLIKQTQTSSLSPSPPQIKESNKRAYRGVRTRPWGKFAAEIRDSTRKGVRVWIGTFDTAEAAALAYDQAAFSTRGSLAVLNFPEEVVRESLKEMSRNSKPLEEGTSPVLALKRKHIIRKKSNKVSKKKIKSEEQIKIQIETKNANINSQNVFVFEDLGAEYLEQLLSLTS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1834g00003 254 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Vivi1834g00003 254 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Vivi1834g00003 254 SMART rav1_2 109 173 IPR001471 GO:0003700|GO:0006355
Vivi1834g00003 254 FunFam Ethylene-responsive transcription factor 2 108 168 - -
Vivi1834g00003 254 CDD AP2 110 168 IPR001471 GO:0003700|GO:0006355
Vivi1834g00003 254 SUPERFAMILY DNA-binding domain 109 168 IPR016177 GO:0003677
Vivi1834g00003 254 MobiDBLite consensus disorder prediction 89 109 - -
Vivi1834g00003 254 MobiDBLite consensus disorder prediction 89 103 - -
Vivi1834g00003 254 PANTHER DNA-BINDING DOMAIN 60 250 IPR044808 GO:0003700|GO:0009873
Vivi1834g00003 254 Gene3D AP2/ERF domain 109 169 IPR036955 GO:0003700|GO:0006355
Vivi1834g00003 254 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Vivi1834g00003 254 ProSiteProfiles AP2/ERF domain profile. 109 167 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1834g00003 107 250 AP2-EREBP Transcription Factor Family AT2G31230 55.280 1.63e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi1834g00003 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1834g00003 K14516 - gmx:100779524 225.328