Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1823g00001 ATGGCATCTAACACCAAAGATGAAGCCTCTTCATCTTCACCTTCCATCCTAACATCAAAATGGACTAACCATGTCTTCTTGAGTTTCAGAGGTGAAGACACTCGCCAAGGTTTCACTGGCCATCTTTTTGCTTCACTGGAAAGAAGAGGGATCAAAACATTCAAAGATGATCATGATCTTAAGAGAGGTGAAGTGATATCTGTAGAACTCAATAAAGCCATTGAAGAGTCTATGTTTGCTATCATCATTCTCTCACCAAACTATGCTTCCTCAACATGGTGTTTGGATGAGCTACAAAAGATTCTTGAATGCAACAAGAGTTTTGGTCAAGCTGTTTTTCCAATCTTCCACGGTGTAGATCCCTCTGATGTCAGGCATCAGCGAGGAAGCTTTACTAAAGCTTTTAGAAAACATGAAGAAAAATTCAGAAAAGATAGAAACAAAATTCAAAGGTGGAGAGATGCTTTAAGAGAAGTTGCTAGTTACTCTGGTTGGGACTCCAAGACCTGGCATGAGGCATCATTGGTGGAAACAATAGTTGACTATATTCAGGAAAATATCATTCCTACATTGCAGGTTTGCACAGATAATTTTGTTGGAATTGATTCACGAATAAAGGAAGTATATGCACTGCTAGAAATGAGGTTAAACGATGTTCGCTTCATAGGCATATGGGGCATGGGCGGCATAGGAAAGACAACTATTGCTAGATTAGTTTATGAAGAGATCAGAGAAAAATTCGAGGTTAGTTGCTTTCTTGCAGACATTAGAGAAACAGTTTCCAAGACAAGTGAAGTTCACTTTCAAATGGAACTTCTTTCTCATCTTAATATAAGAAGCAATGGTATTTATAATGTTCATGATGGCAAAAAGATATTAGCAAACTCCTTTAGCAACAAAAGGGTTCTCCTTGTTCTTGATGATGTAAGTGAATTAAGCCAACTGGAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCAGGAAGTAGAGTAATAATCACAAGTAGAGATAAGCACTTGTTAATGACACATGGAGTGAAAGAAACTTATGAGGCTAAAGGCTTAGTAAAAAATGAAGCTCTTGAGCTCTTTTGTTTGAAAGCCTTTAAACAGAATCAACCTAAAGAAGAGTATTTGAGTTTGTGTGAAGAAGTGGTTGAATATACAAGAGGTCTTCCATTAGCACTTGATGTATTGGGTTCACATTTTCATGGAAGAACTGTTGAGGTTTGGCATAGTGCTTTAGAACAGATAAGAAATGTTCCTCACTTTAAAATCCATGATACATTGAAAATAAGCTATGACAGTTTACAATCTATGGAGAAAAAAATGTTTCTAGATATTGCTTGTTTCTTCAAAGGAATGGAGATAGATGAAGTAATAGAAATATTAGAAGATTGTGGTGACTATCCTAAAATTGGAATTGACATTCTGATTGAAAGATCTTTGGTAACTTCTGATAGGGGAGGCAAAAAGTTGTGGATGCATGATTTACTTGAAGAAATGGGAAGAAATATCGTGTTTCAAGAATCTCCGAATGATCCTGGAAAACGTAGTAGGTTATGGTCTCAAAAAGATATTGATCAAGTATTGACAAAAAATAAGGGAACTGATAAAATTCAAGGCATAGCTATGAACTTAGTTCAACCATATGAAGCAAGTTGGAACATTGAAGCCTTTTCCAAAATAAGTCAGCTAAGATTACTCAAATTATGTGGAATAAAACTTCCCCATGGCCTCAATTGCTTCCCTAGTTCACTAAAAGTTCTTGATTGGAGAGGATGTCCATTGGAAACCCTGCCACTTACTAATCATTTGGATGAAATTGTTGACCTCAAATTGCAGCATAGCAAAATAGAACAACTTTGGCATGGACCACAGTCCATCAATTTGAGCTTTTCGGAGTCTCTAAAGAAATCGCCTGACGTTGTTGGTGTTCCAAATCTTGAGCTATTAGTCCTTGAAAGTTGTACAAACTTAACTGAGATTCATCCCTCCCTTTTAAGCCACAAGAAACTTATTCTATTGAATTTGAAAGACTGCAAAAGGCTCAAAGCGCTTCCATGCAAAATAGAGATAAGTTCCTTGAAGGTTTTATGTCTTTCCGGTTGCAGTGAATTTGAACATCTTCCTGAGTTTGAGGAAAACATGGAAAATCTAAATGTGCTTTCTTTAGACGAGACTTCTATAAAAGAACTACCATCTTCACTTGGATTTCTTGTATCCCTTTTTCTTCTGGATTTAGAAAATTGCAAGAATCTTGTCTCTCTTCCAGATACAATAGGTGAGTTGAAAACTCCCGCAATTCTGAATGTTATTGGCTGCACAGAACTCCGTAGTTTTCCAGAAGATTTTGCTGGTTTTGTAAGGGACGGAAGGATTTGGTTCTTGGGAAAATGA 2400 0.3683 MASNTKDEASSSSPSILTSKWTNHVFLSFRGEDTRQGFTGHLFASLERRGIKTFKDDHDLKRGEVISVELNKAIEESMFAIIILSPNYASSTWCLDELQKILECNKSFGQAVFPIFHGVDPSDVRHQRGSFTKAFRKHEEKFRKDRNKIQRWRDALREVASYSGWDSKTWHEASLVETIVDYIQENIIPTLQVCTDNFVGIDSRIKEVYALLEMRLNDVRFIGIWGMGGIGKTTIARLVYEEIREKFEVSCFLADIRETVSKTSEVHFQMELLSHLNIRSNGIYNVHDGKKILANSFSNKRVLLVLDDVSELSQLENLAGKQEWFGPGSRVIITSRDKHLLMTHGVKETYEAKGLVKNEALELFCLKAFKQNQPKEEYLSLCEEVVEYTRGLPLALDVLGSHFHGRTVEVWHSALEQIRNVPHFKIHDTLKISYDSLQSMEKKMFLDIACFFKGMEIDEVIEILEDCGDYPKIGIDILIERSLVTSDRGGKKLWMHDLLEEMGRNIVFQESPNDPGKRSRLWSQKDIDQVLTKNKGTDKIQGIAMNLVQPYEASWNIEAFSKISQLRLLKLCGIKLPHGLNCFPSSLKVLDWRGCPLETLPLTNHLDEIVDLKLQHSKIEQLWHGPQSINLSFSESLKKSPDVVGVPNLELLVLESCTNLTEIHPSLLSHKKLILLNLKDCKRLKALPCKIEISSLKVLCLSGCSEFEHLPEFEENMENLNVLSLDETSIKELPSSLGFLVSLFLLDLENCKNLVSLPDTIGELKTPAILNVIGCTELRSFPEDFAGFVRDGRIWFLGK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1823g00001 799 Pfam NB-ARC domain 211 440 IPR002182 GO:0043531
Vivi1823g00001 799 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Vivi1823g00001 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 448 IPR027417 -
Vivi1823g00001 799 Gene3D Ribonuclease Inhibitor 693 790 IPR032675 -
Vivi1823g00001 799 PRINTS Disease resistance protein signature 296 310 - -
Vivi1823g00001 799 PRINTS Disease resistance protein signature 389 403 - -
Vivi1823g00001 799 PRINTS Disease resistance protein signature 691 707 - -
Vivi1823g00001 799 PRINTS Disease resistance protein signature 221 236 - -
Vivi1823g00001 799 Gene3D - 354 444 IPR042197 -
Vivi1823g00001 799 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 712 IPR044974 GO:0006952
Vivi1823g00001 799 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Vivi1823g00001 799 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 165 IPR035897 -
Vivi1823g00001 799 Gene3D - 189 349 IPR027417 -
Vivi1823g00001 799 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Vivi1823g00001 799 Gene3D Ribonuclease Inhibitor 553 692 IPR032675 -
Vivi1823g00001 799 SMART till_3 22 162 IPR000157 GO:0007165
Vivi1823g00001 799 SUPERFAMILY L domain-like 509 783 - -
Vivi1823g00001 799 Gene3D - 17 188 IPR035897 -
Vivi1823g00001 799 Pfam TIR domain 24 183 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1823g00001 14 783 WRKY Transcription Factor Family AT4G12020 31.990 2.80e-104 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1823g00001 - - psat:127074983 1489.94