Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi181g00011 ATGGGTGTCCCGGGGAAGTGGATTAGAGCATTGGTTGGTCTAAAGAAATCAGAAAAGCGCGAGTCCTCAGAGAAGGATGGAAATGCTAGCAAGTTTCGCCATCGAAGAAAGCATTCCATCGAAATTGACAGTAGCAAACTTCAAAATGAGTTTGGCGATGATGGTGCTACACCTATTGGAGATGTAGATCAGGCAAATCCCCAATCAAACTTTGATGCTCATTATTCTCCTTCTACTTCACAACAAGCACCGGATGTTGCACATAATCATCAAATCACAAGTGAAGAATGGGCTGCAATATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCTGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTTCAGGCTCGTGTTAGGGCAAGGCGTGTTCGCTTGGCATTGGAAAGTCAAACAGATCAACAGAAACTTCAGCAACAGCTTGTAAACGAAGCCCGTGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAACAAATTCAAACCAAAATATTGAAGAGACAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGGCAGCTTCCTACTTCTTCAGGGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCTTGGGAGAATCGCTTTCTGGACATTAATACGAAAGATGGAGTAAAGGTAGACGAAAATGATGTTATGGATGGCAACAATGGAATCAGACCTCAGTTCAGGCCTACTGATGCAAAATCCAATCTGCCAAACATCCATCCTAGCGTTGTCAGTCACAAAATCGGCCCTTCTGTCAGTGATGGCTGTGAGTCTTCTTCCACTAGCAAGTCAGCAGGTTTGCTCGAGACATCGAACACACAATCTGTTAAACCAAAGTCTAATGCAAATGTTAAAATTCCCGTTGAAGAAAACAACGCAAAATCTGGTTTTCCAAGATCTCACAGTAATCCAAAGGAGAGAAACTCACAGGTAGATAAACAGACGAAAAAGCGGTTATCTCTTCCTAACAATGGGGTTGGTTCCGGGGCTCAAACGACCAGATATCCTACCAGAACTAATGTGAAAGGGACACGTAGTACACAAAAGCCTATAAAGAATAAACCTAAGCTCAATGAAGAAGGGAATAGGAATCTTACTAAATCCGTTCCACAACAAACTGGTGTGTAA 1317 0.4374 MGVPGKWIRALVGLKKSEKRESSEKDGNASKFRHRRKHSIEIDSSKLQNEFGDDGATPIGDVDQANPQSNFDAHYSPSTSQQAPDVAHNHQITSEEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQTDQQKLQQQLVNEARVREIEEGWCDSVGSVEQIQTKILKRQEAAAKRERAMAYALAHQWQAGSRQLPTSSGFEPDKSSWGWNWLERWMAVRPWENRFLDINTKDGVKVDENDVMDGNNGIRPQFRPTDAKSNLPNIHPSVVSHKIGPSVSDGCESSSTSKSAGLLETSNTQSVKPKSNANVKIPVEENNAKSGFPRSHSNPKERNSQVDKQTKKRLSLPNNGVGSGAQTTRYPTRTNVKGTRSTQKPIKNKPKLNEEGNRNLTKSVPQQTGV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi181g00011 438 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Vivi181g00011 438 MobiDBLite consensus disorder prediction 315 351 - -
Vivi181g00011 438 MobiDBLite consensus disorder prediction 274 438 - -
Vivi181g00011 438 MobiDBLite consensus disorder prediction 62 89 - -
Vivi181g00011 438 MobiDBLite consensus disorder prediction 15 89 - -
Vivi181g00011 438 MobiDBLite consensus disorder prediction 290 304 - -
Vivi181g00011 438 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Vivi181g00011 438 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Vivi181g00011 438 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Vivi181g00011 438 FunFam IQ-domain 11 94 145 - -
Vivi181g00011 438 MobiDBLite consensus disorder prediction 378 414 - -
Vivi181g00011 438 MobiDBLite consensus disorder prediction 15 48 - -
Vivi181g00011 438 Gene3D - 95 137 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi181g00011 1 422 IQD Protein Family AT3G22190 56.542 2.34e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi181g00011 - - tpra:123923158 676.011