Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi181g00010 ATGAACAACAACAACAACAACAATTCTTCATTCCTTTCTCATCATCGTAACCCCAAAAACTACAATCATCATCATCATGATCAATGTCCCAAACCCACTGTTCACAAATGTGAGTTTTGTCACAAAATATTCCCCACTGGTCAAGCACTCGGTGGTCACAAGACTTGTCATCGCTCCAACAAACAGATACTTGATGATCATGTTAATAAGGTTTATAAAACTATGAAGGTTACTTTCTCTTTATCTTGTTCTCCAAGTAATCAGAATAATGATGTTGATGCCAAACCCAAAAGACATTCATGGACTAGGGTTTTCAAGACTACCGTTCATCACCCACCTACTGCATCACCCTTGAAACCTAGCCAACAACAAGAGTTACCAGCTGTTGATTTGTTGAGTTTGCTGCCACCAAGATCGTATAATACCAAGAAAAGGAGCAGGAGATATCTTGTTGATGATGGACTCGCTAATAATACTGCTCCAATATTGCCGCTGTTGGATATGTCTCGTGAATCGATTCAGAATCTTGATTTGAGTCATGAGTATAAAAGGGTGAAACTCTCAATCAATGGGAATGATAGTGAGATGATGCACAAACAACATGTGCTGCCAACAAATGATCATGTTGATGAAACAGTAGCGAACATGAGTGAAGGTGAAATAAAAACAGAATCACGTCATGAATTGGGGTCAAGAGTTATTCGAAACTTTGACTTGAACGATCTCCCGACTAATCATGTTGAAACTGTGGTGTCAAGAGTTGTTCGAAACTTTGATTTGAACGACCTCCCGGCTAATGATGTTGAAATAGAATGA 816 0.3897 MNNNNNNNSSFLSHHRNPKNYNHHHHDQCPKPTVHKCEFCHKIFPTGQALGGHKTCHRSNKQILDDHVNKVYKTMKVTFSLSCSPSNQNNDVDAKPKRHSWTRVFKTTVHHPPTASPLKPSQQQELPAVDLLSLLPPRSYNTKKRSRRYLVDDGLANNTAPILPLLDMSRESIQNLDLSHEYKRVKLSINGNDSEMMHKQHVLPTNDHVDETVANMSEGEIKTESRHELGSRVIRNFDLNDLPTNHVETVVSRVVRNFDLNDLPANDVEIE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi181g00010 271 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 23 246 IPR044653 GO:0003700
Vivi181g00010 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Vivi181g00010 271 MobiDBLite consensus disorder prediction 1 16 - -
Vivi181g00010 271 Pfam C2H2-type zinc finger 34 59 - -
Vivi181g00010 271 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Vivi181g00010 271 MobiDBLite consensus disorder prediction 1 28 - -
Vivi181g00010 271 SUPERFAMILY beta-beta-alpha zinc fingers 33 62 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi181g00010 34 57 C2H2 Transcription Factor Family AT3G19580 75.000 1.75e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi181g00010 - - vvo:131625941 555.444