Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi181g00006 ATGCTCCCGACTCGACCCTCCCCCGATGTTGCGCTAACATTTTTGACTCCAAATCATACACTTCAGAGGCTAATCAAAGCATGGATTTCATCAAATGAAGCCAAAGATGTTGATGAACAAGTTCCACCTCCAAAATATTCTCTCAATAGATTCCATCTTCAGAAGCTTGTTAACAATCTCGAGGTTCCGAGTTGCTTTCGAACCGCAATGGAGAAGATTCATGATCTTGCTAAACAAAGTGAGAGAAATAGAACGTGCATGGTTGAAGTAGGTGTAACCAAGGCTATGGTTATGGTGATTAAGAAGAGTTTCAAAGAAGGTAACATTATTTGTTTAGAAGAAGGTTTGAAAACTATTCGTCTTTTGTGGCACGAAGCGATGGTTAAGAACATGATCAAGCCTTTGGTTGGAGGAAACATGGAGTTCATCAACTCCTTGAGTTGGATTTTGAAAATTTACATTGATAACAACGATGTGAAAATGGTAAATGAAGTAATGCTATTATTAAAATTAACAATTGAGATTGTAGATTCATCTCTTATAGGAAATTTAAACATTGAATTCTTTAGAGAAATTGTGAGAGTACTTCGAAAGCGAGGGTTATTCTCTAAACAAACGATTAAATCTGCGTTACATGTTCTTATAGGCACGTCCTCGTTAGGTAGAAACCGAACGAGGATCATGGAAGCTGGTGGAGTAAGTGAACTTATTGAAATCGAGCTTGAAAACCCGAAGAAGAGCATGACCGAGCTTATATTCAATCTTTTGGCGCATTTGTGTTCGTGCGCGGAAGGAAGAGAACAATTTTTGAGGCATGCGGCGGGTATAGCGATGGTTACTAAAAGGATTTTGAGGGTTTCGGCCGCAACCGATGACCTAGCGATTCAAGTAATTTCAATGATTGCGAAGTATTCATCTTCTAAAGAGACTGTTTTAGAGATGTTGAGGGTTGGAGCGGTTTCAAAGCTTTGCATGGTAATGCAGGCAGATTGTGCTTCTTATTTGAAAGAGAAAGCAAGAGACATACTTAGGTTACACTCCACTACATGGAATAATTCTCCTTGCATACAAGTGTATTTTTTAACTAGGAACCAAAGGTGA 1101 0.3887 MLPTRPSPDVALTFLTPNHTLQRLIKAWISSNEAKDVDEQVPPPKYSLNRFHLQKLVNNLEVPSCFRTAMEKIHDLAKQSERNRTCMVEVGVTKAMVMVIKKSFKEGNIICLEEGLKTIRLLWHEAMVKNMIKPLVGGNMEFINSLSWILKIYIDNNDVKMVNEVMLLLKLTIEIVDSSLIGNLNIEFFREIVRVLRKRGLFSKQTIKSALHVLIGTSSLGRNRTRIMEAGGVSELIEIELENPKKSMTELIFNLLAHLCSCAEGREQFLRHAAGIAMVTKRILRVSAATDDLAIQVISMIAKYSSSKETVLEMLRVGAVSKLCMVMQADCASYLKEKARDILRLHSTTWNNSPCIQVYFLTRNQR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi181g00006 366 Gene3D - 52 352 IPR011989 -
Vivi181g00006 366 PANTHER WDSAM1 PROTEIN 11 357 IPR045185 GO:0061630
Vivi181g00006 366 SUPERFAMILY ARM repeat 56 333 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi181g00006 15 363 U-box Gene Family AT3G11840 33.083 3.48e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi181g00006 - - vvo:131625920 716.457