Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi180g00015 ATGCCTAAGCAAATAAATGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAGGATGCTAGGTCAGTGAGAATCAAGAGGAGCAAGGATGTCGTTAAGTTCAAGGTCAGATGTTCCAAGTACCTTTACACACTCTGTGTGTTTGACGTTGAGAAAGCCGACAAGTTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTTTAA 210 0.4238 MPKQINEIKDFLLTARRKDARSVRIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi180g00015 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Vivi180g00015 69 FunFam 60S ribosomal protein L38 1 69 - -
Vivi180g00015 69 Gene3D - 1 69 IPR038464 -
Vivi180g00015 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi180g00015 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.754 8.64e-43 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi180g00015 K02923 - thj:109116186 135.191