Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi180g00010 ATGAACAACATAAAAAATATGGCAAAGTTTAGTCAAAGCAATGCTACTCATCATGATTTCCTTATTGGAAAGGTTATTTTTGTTGTTCTTTTATTATCACATATTTCATTTCAAGTTGCAACATGTGGCTCTACAGTAAAGTTTCTTCCTGGATTCAATGGTCCCCTTCCTTTTCTGCTCGAAACTGGGTATGTGGGAGTGGGAGAAAAAGAGGAAGTGCAAGTGTTTTATTATTTCATTGAATCAGAAAATAATCCCAAAGAAGATCCTCTCATGCTTTGGCTAACGGGTGGACCTGGTTGTTCTGCTTTGTCTGGTCTTGTCTTTGAAATAGGGCCAATTGGATTTAAAAGAGAGGAATACAATGGGAGCTTGCCAAATCTGATCTTGAGGGAACATTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCTGTTTCTACGGGCTTCACTTATGCCACAACAGATTCGGGTTCTCAACGACGTGACTCCATACAAATTGACCAAGCTCACCAATTTTTTAGAAAGTGGTTGATCGATCATCCAAAATTTCAATCAAATGAAGTTTACATCAGCGGCGACTCATATTCGGGTATTACTCTTCCTGTAATTGTTCAAGAAATTATACAAGCAAATGAAAAAGGGATCCCACCATGGATAAATCTTCAGGGATACGTGTTAGGGAATCCTGTAACAAATAAAAAGGAAATAAACTATAGAATCCCTTTTGCTCATGGAACTGGACTCATATCTGATGAACTATACGAGTCACTGCAAAAAAATTGTAATGGAGATTATACAAATTCAGAGACCAAAAGAGTTTTATGTTCCAAAGTACTCTGTTCTTTCGAAAAGGCTATATCAGAAATTAGTATAGCCCATATTTTAGAACCGCTATGTACATGGCTAAATACTGAAAATTCTCCAAGGAGATCTCTAATTAATAAATATCACTCCAAAGTGTCGCCCTTAAAATGCCGAAACCTTCCATATAAACTTTCCGCTTATTGGGCCAACGATGATAATGTTCGCAAAGCACTGCACATACGTAAGGGAAGTATTGGGAAATGGCAACGTTGTTCCTTTGATATACCTTATGAGGAAGATATCCCTAGTAGCTTTGATTATCATGTAAATCTAAGTAGAAAAGGATATCGTTCACTAATTTACAGTGGTGATCATGACATGAAGGTTCCATTATTGGATACCAAAGCATGGATAAAATCTTTAAATTATTCCATTGTTGATGATTGGAGATCTTGGTATACAAATGAACAAGTTTCAGGATACACAAGAACTTACTCGAATCAGATGACATTTGCAACTGTGAAGGGTGGAGGACACACTGCACCTGAGTTCCTTCCTGAAGAATGTTTCGCCATGTTTAGTAGGTGGATATCTAAGAGACCTTTGTAG 1422 0.3713 MNNIKNMAKFSQSNATHHDFLIGKVIFVVLLLSHISFQVATCGSTVKFLPGFNGPLPFLLETGYVGVGEKEEVQVFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPIGFKREEYNGSLPNLILREHSWTKVSSIIFVDLPVSTGFTYATTDSGSQRRDSIQIDQAHQFFRKWLIDHPKFQSNEVYISGDSYSGITLPVIVQEIIQANEKGIPPWINLQGYVLGNPVTNKKEINYRIPFAHGTGLISDELYESLQKNCNGDYTNSETKRVLCSKVLCSFEKAISEISIAHILEPLCTWLNTENSPRRSLINKYHSKVSPLKCRNLPYKLSAYWANDDNVRKALHIRKGSIGKWQRCSFDIPYEEDIPSSFDYHVNLSRKGYRSLIYSGDHDMKVPLLDTKAWIKSLNYSIVDDWRSWYTNEQVSGYTRTYSNQMTFATVKGGGHTAPEFLPEECFAMFSRWISKRPL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi180g00010 473 Gene3D alpha/beta hydrolase 56 472 IPR029058 -
Vivi180g00010 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 455 IPR001563 GO:0004185|GO:0006508
Vivi180g00010 473 FunFam Serine carboxypeptidase-like 11 40 473 - -
Vivi180g00010 473 SUPERFAMILY alpha/beta-Hydrolases 46 472 IPR029058 -
Vivi180g00010 473 Pfam Serine carboxypeptidase 50 469 IPR001563 GO:0004185|GO:0006508
Vivi180g00010 473 FunFam Carboxypeptidase 327 472 - -
Vivi180g00010 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Vivi180g00010 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Vivi180g00010 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Vivi180g00010 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi180g00010 40 69 Calmodulin-binding Proteins AT2G22960 70.000 8.83e-08 50.4